RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 C5orf38Q86SI9 138 aa7.24□□□□□ -1.25
COL13A1-207ENST00000478219 DEFB124Q8NES8 71 aa7.24□□□□□ -1.25
COL13A1-207ENST00000478219 DAZ1Q9NQZ3 744 aaKnown RBP7.24□□□□□ -1.25
COL13A1-207ENST00000478219 DAZ3Q9NR90 486 aaKnown RBP7.24□□□□□ -1.25
COL13A1-207ENST00000478219 A0A1B0GX51 115 aa7.24□□□□□ -1.25
COL13A1-207ENST00000478219 SDIM1Q6ZPB5 146 aa7.24□□□□□ -1.25
COL13A1-207ENST00000478219 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 M0R1W7 72 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 EDN2P20800 178 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 APRG1Q8IVJ8 170 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 SPTAN1Q13813 2472 aaKnown RBP7.23□□□□□ -1.25
COL13A1-207ENST00000478219 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 OVOL1O14753 267 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 Q9UF83 564 aa7.23□□□□□ -1.25
COL13A1-207ENST00000478219 ACYP1P07311 99 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 CRYGAP11844 174 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.22□□□□□ -1.25
COL13A1-207ENST00000478219 IGHG2P01859 326 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 TIRAPP58753 221 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 MRPS36P82909 103 aaKnown RBP7.22□□□□□ -1.25
COL13A1-207ENST00000478219 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
COL13A1-207ENST00000478219 CD28P10747 220 aa7.21□□□□□ -1.25
COL13A1-207ENST00000478219 BEAN1Q3B7T3 259 aa7.21□□□□□ -1.25
COL13A1-207ENST00000478219 TMEM219Q86XT9 240 aa7.21□□□□□ -1.25
COL13A1-207ENST00000478219 DSCR8Q96T75 97 aa7.21□□□□□ -1.25
COL13A1-207ENST00000478219 CSMD2Q7Z408 3487 aa7.21□□□□□ -1.25
COL13A1-207ENST00000478219 DOPEY2Q9Y3R5 2298 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 TRAV12-2A0A075B6T6 113 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 IGHV3OR16-10A0A075B7F0 116 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 TRAV13-1A0A0B4J241 112 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 TRAV25A0A0B4J276 109 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 A0A1W2PRX2 142 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 KLLNB2CW77 178 aa7.21□□□□□ -1.26
COL13A1-207ENST00000478219 HIST1H4AP62805 103 aaKnown RBP7.21□□□□□ -1.26
COL13A1-207ENST00000478219 ZNF625Q96I27 306 aaPredicted RBP7.21□□□□□ -1.26
COL13A1-207ENST00000478219 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.26
COL13A1-207ENST00000478219 PROK1P58294 105 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 C9orf129Q5T035 196 aaKnown RBP7.2□□□□□ -1.26
COL13A1-207ENST00000478219 OTOGLQ3ZCN5 2332 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 ZFP36P26651 326 aaKnown RBP7.2□□□□□ -1.26
COL13A1-207ENST00000478219 MINOS1Q5TGZ0 78 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.2□□□□□ -1.26
COL13A1-207ENST00000478219 DPH3Q96FX2 82 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 KLK9Q9UKQ9 250 aa7.2□□□□□ -1.26
COL13A1-207ENST00000478219 TLN1Q9Y490 2541 aaKnown RBP7.2□□□□□ -1.26
COL13A1-207ENST00000478219 A0A087WVE0 104 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 IGHV3-16A0A0C4DH30 117 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 COX7A2LO14548 114 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 KLK9Q2XQG4 91 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 SOSTDC1Q6X4U4 206 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 LINC01560Q8TB33 94 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 WIPF1O43516 503 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 RPS28P62857 69 aaKnown RBP7.19□□□□□ -1.26
COL13A1-207ENST00000478219 Q9HAA7 133 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 PEMTQ9UBM1 199 aa7.19□□□□□ -1.26
COL13A1-207ENST00000478219 IGHV3-11P01762 117 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 C9orf85Q96MD7 179 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 CXCL5P42830 114 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 OR13C6PQ8NH95 151 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 LINC00308Q8TCZ7 52 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.18□□□□□ -1.26
COL13A1-207ENST00000478219 TTC28Q96AY4 2481 aa7.18□□□□□ -1.26
COL13A1-207ENST00000478219 ATP5G1P05496 136 aa7.17□□□□□ -1.26
COL13A1-207ENST00000478219 GRNP28799 593 aaKnown RBP7.17□□□□□ -1.26
COL13A1-207ENST00000478219 HOXD3P31249 432 aaPredicted RBP7.17□□□□□ -1.26
COL13A1-207ENST00000478219 KLRB1Q12918 225 aa7.17□□□□□ -1.26
COL13A1-207ENST00000478219 Q5XG85 94 aa7.17□□□□□ -1.26
COL13A1-207ENST00000478219 UPK3BQ9BT76 320 aa7.17□□□□□ -1.26
COL13A1-207ENST00000478219 CDKN2A-AS1Q9UH64 79 aa7.17□□□□□ -1.26
COL13A1-207ENST00000478219 TRACP01848 142 aa7.17□□□□□ -1.26
COL13A1-207ENST00000478219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.16□□□□□ -1.26
COL13A1-207ENST00000478219 IGKV2-29A2NJV5 120 aaPredicted RBP7.16□□□□□ -1.26
COL13A1-207ENST00000478219 RHPN1-AS1Q9BWJ2 59 aa7.16□□□□□ -1.26
COL13A1-207ENST00000478219 ATOX1O00244 68 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 SAA4P35542 130 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 COX6A2Q02221 97 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 CREBBPQ92793 2442 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 PRM2P04554 102 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 RPL18AQ02543 176 aaKnown RBP7.15□□□□□ -1.26
COL13A1-207ENST00000478219 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 PYGO1Q9Y3Y4 419 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 MINOS1-NBL1R4GNA1 71 aa7.15□□□□□ -1.26
COL13A1-207ENST00000478219 LINC01561Q8N1V8 128 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 Q9H8V8 135 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 KNCNA6PVL3 124 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 F5H768 121 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 C5orf56Q8N8D9 126 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 C2CD3Q4AC94 2353 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 TIMM17BO60830 172 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 Q6ZSN1 163 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 CHCHD7Q9BUK0 85 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms