RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 PIMREGQ9BSJ6 248 aa10.02□□□□□ -0.81
HLA-DMA-208ENST00000477541 DNHD1Q96M86 4753 aa10.01□□□□□ -0.81
HLA-DMA-208ENST00000477541 Q1RN00 199 aa10.01□□□□□ -0.81
HLA-DMA-208ENST00000477541 TIMM21Q9BVV7 248 aa10.01□□□□□ -0.81
HLA-DMA-208ENST00000477541 FAM240AA0A1B0GVK7 77 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 K7EQG2 157 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 IFITM1P13164 125 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 GAGE2BQ13066 116 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 GAGE2EQ4V326 116 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 Q8N1Y9 231 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 RAX2Q96IS3 184 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 GAGE2DQ9UEU5 116 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 ABCA2Q9BZC7 2435 aa10□□□□□ -0.81
HLA-DMA-208ENST00000477541 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 H3BUX3 64 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 GAGE5Q13069 117 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 GAGE6Q13070 117 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 A0A0J9YXV3 536 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 TINCRA0A1B0GVN0 87 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 H3BMM0 161 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 LITAFQ99732 161 aa9.99□□□□□ -0.81
HLA-DMA-208ENST00000477541 IGKV3-7A0A075B6H7 116 aa9.98□□□□□ -0.81
HLA-DMA-208ENST00000477541 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
HLA-DMA-208ENST00000477541 IGHV4-39P01824 125 aa9.98□□□□□ -0.81
HLA-DMA-208ENST00000477541 CD28P10747 220 aa9.98□□□□□ -0.81
HLA-DMA-208ENST00000477541 MIAQ16674 131 aa9.98□□□□□ -0.81
HLA-DMA-208ENST00000477541 PSMB8P28062 276 aa9.97□□□□□ -0.81
HLA-DMA-208ENST00000477541 BRD3OSQ6XYD6 125 aa9.97□□□□□ -0.81
HLA-DMA-208ENST00000477541 NTN5Q8WTR8 489 aaPredicted RBP9.97□□□□□ -0.81
HLA-DMA-208ENST00000477541 ICOSQ9Y6W8 199 aa9.97□□□□□ -0.81
HLA-DMA-208ENST00000477541 LY6EQ16553 131 aa9.96□□□□□ -0.81
HLA-DMA-208ENST00000477541 DEFB121Q5J5C9 76 aa9.96□□□□□ -0.81
HLA-DMA-208ENST00000477541 MED13LQ71F56 2210 aa9.96□□□□□ -0.81
HLA-DMA-208ENST00000477541 CSMD2Q7Z408 3487 aa9.96□□□□□ -0.81
HLA-DMA-208ENST00000477541 TRIAP1O43715 76 aa9.96□□□□□ -0.82
HLA-DMA-208ENST00000477541 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.82
HLA-DMA-208ENST00000477541 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
HLA-DMA-208ENST00000477541 TACC2O95359 2948 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 IGHV3OR16-10A0A075B7F0 116 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 A8MTW9 85 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 TGFAP01135 160 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 NDUFV3P56181 108 aaKnown RBP9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 C10orf105Q8TEF2 133 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 COPS9Q8WXC6 57 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 VSIG2Q96IQ7 327 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 NDUFA12Q9UI09 145 aa9.95□□□□□ -0.82
HLA-DMA-208ENST00000477541 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
HLA-DMA-208ENST00000477541 GATA3P23771 443 aa9.94□□□□□ -0.82
HLA-DMA-208ENST00000477541 BLCAPP62952 87 aa9.94□□□□□ -0.82
HLA-DMA-208ENST00000477541 C2orf82Q6UX34 121 aa9.94□□□□□ -0.82
HLA-DMA-208ENST00000477541 HRNRQ86YZ3 2850 aaPredicted RBP9.94□□□□□ -0.82
HLA-DMA-208ENST00000477541 LST1O00453 97 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 TTC32Q5I0X7 151 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 TNFRSF18Q9Y5U5 241 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 SPG11Q96JI7 2443 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 H7C2G1 150 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 SPXQ9BT56 116 aa9.93□□□□□ -0.82
HLA-DMA-208ENST00000477541 CCDC168Q8NDH2 2452 aa9.92□□□□□ -0.82
HLA-DMA-208ENST00000477541 IGHV4-61A0A0C4DH41 118 aa9.92□□□□□ -0.82
HLA-DMA-208ENST00000477541 TIRAPP58753 221 aa9.92□□□□□ -0.82
HLA-DMA-208ENST00000477541 SPINK13Q1W4C9 94 aa9.92□□□□□ -0.82
HLA-DMA-208ENST00000477541 TMEM61Q8N0U2 210 aa9.92□□□□□ -0.82
HLA-DMA-208ENST00000477541 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
HLA-DMA-208ENST00000477541 TRAV12-2A0A075B6T6 113 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 IGLV5-45A0A087WSX0 123 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 GAGE7O76087 117 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 ACYP1P07311 99 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 MSMBP08118 114 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 GAGE12FP0CL80 117 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 GAGE12GP0CL81 117 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 GAGE12IP0CL82 117 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 GAGE4Q13068 117 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 WFDC12Q8WWY7 111 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
HLA-DMA-208ENST00000477541 IGHV3-64A0A075B6Q5 118 aa9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 H7C423 109 aa9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 NDUFA1O15239 70 aa9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 NHLRC4P0CG21 123 aaPredicted RBP9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 ZNF415Q09FC8 603 aa9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.82
HLA-DMA-208ENST00000477541 DCHS2Q6V1P9 2916 aa9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 TEX49A0A1B0GTD5 131 aa9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 PRSS2P07478 247 aa9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 ELANEP08246 267 aa9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 PRRC2AP48634 2157 aaKnown RBP9.9□□□□□ -0.83
HLA-DMA-208ENST00000477541 CHCHD7Q9BUK0 85 aa9.89□□□□□ -0.83
HLA-DMA-208ENST00000477541 EDN2P20800 178 aa9.88□□□□□ -0.83
HLA-DMA-208ENST00000477541 FAM19A3Q7Z5A8 133 aa9.88□□□□□ -0.83
HLA-DMA-208ENST00000477541 DEFB104AQ8WTQ1 72 aa9.88□□□□□ -0.83
HLA-DMA-208ENST00000477541 TRBV7-7A0A0K0K1E9 115 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms