RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	EFCAB5	A4FU69	1503 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	HMGXB3	Q12766	1538 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	NEXMIF	Q5QGS0	1516 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	KCP	Q6ZWJ8	1503 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	DUOX2	Q9NRD8	1548 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	PRX	Q9BXM0	1461 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	ARFGEF3	Q5TH69	2177 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	TRBV25-1	A0A075B6N4	114 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447		A0A087WWC5	75 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447		A0A0G2JND7	137 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447		A0A0J9YY99	117 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	TRBV10-1	A0A0K0K1A3	114 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	LOC101927531	A0A1B0GV80	90 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	KANTR	A0A1W2PQU2	76 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	C7orf77	A4D0Y5	90 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	NUPR2	A6NF83	97 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	PMCHL1	Q16048	86 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	DEFB121	Q5J5C9	76 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	C10orf55	Q5SWW7	151 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	RPL7L1	Q6DKI1	246 aa	Known RBP	0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	XAF1	Q6GPH4	301 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	C2orf82	Q6UX34	121 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	ZNF818P	Q6ZRF7	136 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	LINC00643	Q86TS7	51 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	CLECL1	Q8IZS7	167 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447		Q8N6K4	173 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	PATE1	Q8WXA2	126 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	MANBAL	Q9NQG1	85 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	PRO1854	Q9UHT4	67 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	MYH10	P35580	1976 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	GREB1	Q4ZG55	1949 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	NUP98	P52948	1817 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	MAST2	Q6P0Q8	1798 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	KIDINS220	Q9ULH0	1771 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	COL4A6	Q14031	1691 aa		0.75	□□□□□ -2.29
TARDBP-208	ENST00000477447	ALPK3	Q96L96	1907 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	TRAV23DV6	A0A075B6W5	121 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	IGLV3-32	A0A0A0MS00	114 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	TMEM30CP	A0ZSE6	113 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447		A6NIN4	97 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	TMEM14DP	A8MWL7	114 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	CHKB-CPT1B	H3BT56	60 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	HCRT	O43612	131 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	IGHV3-30	P01768	117 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	ACYP1	P07311	99 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	SFTA3	P0C7M3	94 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	IGHV3-30-5	P0DP03	117 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	PRB3	Q04118	309 aa	Predicted RBP	0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	DMAC1	Q96GE9	116 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	LIMD2	Q9BT23	127 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	NDUFA4L2	Q9NRX3	87 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	POLE	Q07864	2286 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	COL24A1	Q17RW2	1714 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	LRRIQ1	Q96JM4	1722 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	ZC3H13	Q5T200	1668 aa	Known RBP	0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	TARBP1	Q13395	1621 aa	Known RBP	0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	IQGAP3	Q86VI3	1631 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	MROH1	Q8NDA8	1641 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	DOCK4	Q8N1I0	1966 aa		0.74	□□□□□ -2.29
TARDBP-208	ENST00000477447	FANCD2	Q9BXW9	1451 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	CD163L1	Q9NR16	1453 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	PHIP	Q8WWQ0	1821 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	STRC	Q7RTU9	1775 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	ABCA3	Q99758	1704 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447		A0A087WTM6	91 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447		A0A087WXM4	84 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	TRBV6-7	A0A0A0MS04	114 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	FAM223B	A6NKX1	122 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	IQCF6	A8MYZ5	107 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	UMAD1	C9J7I0	102 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	HMGN4	O00479	90 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	IGLV3-1	P01715	115 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	HMGN2	P05204	90 aa	Known RBP	0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	COX6C	P09669	75 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	RNASE3	P12724	160 aa	Known RBP	0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	PDE6G	P18545	87 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	EDDM3B	P56851	147 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	ZNF56	Q15929	161 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	C10orf128	Q5T292	105 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	TMEM170B	Q5T4T1	132 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	DEFB132	Q7Z7B7	95 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	C20orf197	Q8N268	126 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	PROK2	Q9HC23	129 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	TMEM14B	Q9NUH8	114 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	PSENEN	Q9NZ42	101 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	MRPL36	Q9P0J6	103 aa	Known RBP	0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	PREX2	Q70Z35	1606 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	PTPN23	Q9H3S7	1636 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	CCDC180	Q9P1Z9	1646 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	MAP3K4	Q9Y6R4	1608 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	DLG5	Q8TDM6	1919 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	NUP210L	Q5VU65	1888 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	CDK5RAP2	Q96SN8	1893 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	CLASP1	Q7Z460	1538 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	ASXL1	Q8IXJ9	1541 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	EHBP1L1	Q8N3D4	1523 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	ECM29	Q5VYK3	1845 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	ZFHX3	Q15911	3703 aa		0.73	□□□□□ -2.29
TARDBP-208	ENST00000477447	COL4A5	P29400	1685 aa		0.72	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms