RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 SIVA1O15304 175 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 PAX4O43316 350 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 OR5AL1P0C617 328 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 LYPD5Q6UWN5 251 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 RASL10AQ92737 203 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 TPPP3Q9BW30 176 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 NAGKQ9UJ70 344 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 HHLA3Q9XRX5 114 aa7.51□□□□□ -1.21
EXOSC1-208ENST00000476234 A0A087WTM6 91 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 LOC100131303A0A0U1RQF7 123 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 SNAI2O43623 268 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 FAM104BQ5XKR9 115 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 PRO0255Q9UI72 69 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
EXOSC1-208ENST00000476234 NXPH4O95158 308 aa7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 SMR3BP02814 79 aaPredicted RBP7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 RNASE3P12724 160 aaKnown RBP7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 NTF3P20783 257 aa7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 AMTP48728 403 aa7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 ICOSQ9Y6W8 199 aa7.49□□□□□ -1.21
EXOSC1-208ENST00000476234 MUC21A0A0G2JKD1 596 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 MUC21A0A140T8X8 626 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 K7EQD1 137 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 CIDEAO60543 219 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 SCGB1D1O95968 90 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 LINC00614P0C842 121 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 DNAH10OSP0CZ25 163 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 PMCHP20382 165 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 ASIPP42127 132 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 TWIST1Q15672 202 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 Q8N976 141 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 TMEM191AQ9H0A3 160 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
EXOSC1-208ENST00000476234 TRGV4A0A0C4DH28 118 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 M0R2P5 195 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 HSBP1O75506 76 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 PKIAP61925 76 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 MRPL51Q4U2R6 128 aaKnown RBP7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 RNASEKQ6P5S7 137 aaKnown RBP7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 Q6ZSN1 163 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 MSRB1Q9NZV6 116 aa7.47□□□□□ -1.21
EXOSC1-208ENST00000476234 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 TRAV4A0A0B4J268 109 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 LINC00587B1AMM8 73 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 GYPEP15421 78 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 RAB4AP20338 218 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 GCSHP23434 173 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 S100A4P26447 101 aaKnown RBP7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 SSTP61278 116 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 CACNG7P62955 275 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 MRPL23Q16540 153 aaKnown RBP7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 WFDC10BQ8IUB3 73 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 ZNF664Q8N3J9 261 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
EXOSC1-208ENST00000476234 KRTAP29-1A8MX34 341 aaPredicted RBP7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 K7EP13 123 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 C3orf79P0CE67 100 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 GATA1P15976 413 aaPredicted RBP7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 KRTDAPP60985 99 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 NEGR1Q7Z3B1 354 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 OR4C5Q8NGB2 326 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 PRELID3AQ96N28 172 aa7.45□□□□□ -1.22
EXOSC1-208ENST00000476234 D6R8Y8 96 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 PPBPP02775 128 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 TEX43Q6ZNM6 134 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 OR10AG1Q8NH19 301 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 PRO1933Q9H354 126 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 Q9UF83 564 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 PHLDA3Q9Y5J5 127 aa7.44□□□□□ -1.22
EXOSC1-208ENST00000476234 TRAV9-2A0A087WT02 112 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 IGHV3-73A0A0B4J1V6 119 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 IGHV1-24A0A0C4DH33 117 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 RS1O15537 224 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 CKS2P33552 79 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 CFAP126Q5VTH2 177 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 SYT8Q8NBV8 401 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
EXOSC1-208ENST00000476234 LINC01546A6NGU7 62 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 A8MWV9 139 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 NPYP01303 97 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 HAMPP81172 84 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 PMCHL1Q16048 86 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 ZNF876PQ49A33 203 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 SLC25A29Q8N8R3 303 aa7.42□□□□□ -1.22
EXOSC1-208ENST00000476234 JPT2Q9H910 190 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms