RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 TNS1Q9HBL0 1735 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ATG2AQ2TAZ0 1938 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 CEP192Q8TEP8 1941 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 MICAL3Q7RTP6 2002 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 A0A0J9YY99 117 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 TRBV6-1A0A0K0K1D8 114 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 TRBV7-7A0A0K0K1E9 115 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 C7orf77A4D0Y5 90 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 CEBPZOSA8MTT3 80 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 TMEM14DPA8MWL7 114 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 F8VRH5 84 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 SYS1-DBNDD2H3BUS1 97 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 H3BUT2 72 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 H3BVH4 76 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 PIN1P1O15428 100 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 MRPS14O60783 128 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 NDUFB1O75438 58 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 IGLV1-51P01701 117 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 IGHV3-30P01768 117 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 MT-ATP8P03928 68 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 CLPSP04118 112 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 TFF1P04155 84 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 HMGN2P05204 90 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 P0C880 135 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 IGHV3-30-5P0DP03 117 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 HMGA1P17096 107 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 PDE6GP18545 87 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 UBE2D1P51668 147 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 HAMPP81172 84 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 SERF2P84101 59 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ESPL1Q14674 2120 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 CFAP126Q5VTH2 177 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ATP5EP2Q5VTU8 51 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 HCP5Q6MZN7 132 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 CSAG1Q6PB30 78 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 LINC00643Q86TS7 51 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 FAM19A2Q8N3H0 131 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 DEFB119Q8N690 84 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 FAM167A-AS1Q96KT0 104 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 PRO2289Q9P1D8 64 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ARL2-SNX15V9GYD0 113 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ATP10BO94823 1461 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 GOLGA3Q08378 1498 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 BCL9LQ86UU0 1499 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 MLH3Q9UHC1 1453 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 SHANK2Q9UPX8 1470 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 GLI3P10071 1580 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 CLTCQ00610 1675 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 SCN11AQ9UI33 1791 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ANK1P16157 1881 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 EXPH5Q8NEV8 1989 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 PCDH15Q96QU1 1955 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 ARHGAP32A7KAX9 2087 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 MDC1Q14676 2089 aaKnown RBP0.39□□□□□ -2.35
HDAC9-222ENST00000474742 COL6A6A6NMZ7 2263 aa0.39□□□□□ -2.35
HDAC9-222ENST00000474742 HFM1A2PYH4 1435 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 ABCC5O15440 1437 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 BLMP54132 1417 aaPredicted RBP0.38□□□□□ -2.35
HDAC9-222ENST00000474742 CASKIN1Q8WXD9 1431 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 SLIT2O94813 1529 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 EPRSP07814 1512 aaKnown RBP0.38□□□□□ -2.35
HDAC9-222ENST00000474742 ABCC1P33527 1531 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 DUOX2Q9NRD8 1548 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 LRRC37A3O60309 1634 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 TOP2BQ02880 1626 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 PEAK1Q9H792 1746 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 DOCK2Q92608 1830 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 MYO7AQ13402 2215 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 AHCTF1Q8WYP5 2266 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 DOCK11Q5JSL3 2073 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 CASP8AP2Q9UKL3 1982 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 PLXNA3P51805 1871 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 CPAMD8Q8IZJ3 1885 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 PLXNA4Q9HCM2 1894 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 LAMB4A4D0S4 1761 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 RGPD4Q7Z3J3 1758 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 USP54Q70EL1 1684 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 UNC13BO14795 1591 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 FRMPD1Q5SYB0 1578 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 FANCAO15360 1455 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 ADGRL2O95490 1459 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 POLA1P09884 1462 aaPredicted RBP0.38□□□□□ -2.35
HDAC9-222ENST00000474742 NCOA2Q15596 1464 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 MAGI2Q86UL8 1455 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 ARHGAP35Q9NRY4 1499 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 TRBV25-1A0A075B6N4 114 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 FXYD6-FXYD2A0A087WZ82 144 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 TRAV1-2A0A0B4J238 106 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 A0A0D9SFI3 127 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 MYMXA0A1B0GTQ4 84 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 A0A1B0GUT8 65 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 LOC101927531A0A1B0GV80 90 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 A0A1W2PNN7 141 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 IGLC7A0M8Q6 106 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 FAM223BA6NKX1 122 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 A6NN06 94 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 F8WEM9 126 aa0.38□□□□□ -2.35
HDAC9-222ENST00000474742 M0R135 149 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms