RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 CLPSL2Q6UWE3 100 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 FER1L6-AS1Q8NA97 138 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 OR2D3Q8NGH3 330 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 UBR4Q5T4S7 5183 aa5.68□□□□□ -1.5
TNFRSF9-202ENST00000474475 TRBV20OR9-2A0A075B6H5 130 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 TRBV25-1A0A075B6N4 114 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 RAB5CP51148 216 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 RPS20P60866 119 aaKnown RBP5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 MEF2BQ02080 365 aaPredicted RBP5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 IQCJQ1A5X6 159 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 LINC00269Q8N2A0 174 aa5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 DAZAP1Q96EP5 407 aaKnown RBP5.67□□□□□ -1.5
TNFRSF9-202ENST00000474475 IGHV1-24A0A0C4DH33 117 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 H7C1H1 209 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 GNG4P50150 75 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 SULT1A2P50226 295 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 NKX2-5P52952 324 aaPredicted RBP5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 CACNG7P62955 275 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 SMIM12Q96EX1 92 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 MED9Q9NWA0 146 aa5.66□□□□□ -1.5
TNFRSF9-202ENST00000474475 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 F2Z2F3 143 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 TEX46H3BTG2 121 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 PDE6DO43924 150 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 P01737 135 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 REG3AQ06141 175 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 EIF5AL1Q6IS14 154 aaKnown RBP5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 RASL11AQ6T310 242 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 C20orf203Q8NBC4 194 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.5
TNFRSF9-202ENST00000474475 IGLV4-60A0A075B6I1 120 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 XKRY2A2RUG3 117 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 PANO1I0J062 215 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 IFNA1P01562 189 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 TRGC1P0CF51 173 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 BCL2P10415 239 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 NTF3P20783 257 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 CTRLP40313 264 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 C9orf62Q8N4C0 152 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 TMEM243Q9BU79 118 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 DPH3P1Q9H4G8 78 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 NIT2Q9NQR4 276 aa5.64□□□□□ -1.51
TNFRSF9-202ENST00000474475 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
TNFRSF9-202ENST00000474475 SDIM1Q6ZPB5 146 aa5.63□□□□□ -1.51
TNFRSF9-202ENST00000474475 TCTE3Q8IZS6 198 aa5.63□□□□□ -1.51
TNFRSF9-202ENST00000474475 PGLYRP4Q96LB8 373 aa5.63□□□□□ -1.51
TNFRSF9-202ENST00000474475 BIN3Q9NQY0 253 aa5.63□□□□□ -1.51
TNFRSF9-202ENST00000474475 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 K7EN84 100 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 HNRNPA3P51991 378 aaKnown RBP5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 TWIST1Q15672 202 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 WDR73Q6P4I2 378 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 SLC51BQ86UW2 128 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 OCC1Q8TAD7 63 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 CNFNQ9BYD5 112 aa5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 RNASE7Q9H1E1 156 aaKnown RBP5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 RPP21Q9H633 154 aaKnown RBP5.62□□□□□ -1.51
TNFRSF9-202ENST00000474475 TRAV26-2A0A0B4J265 109 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 hDV102S1A0JD36 115 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 OXTP01178 125 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 SLPIP03973 132 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 AMTP48728 403 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 CNBPP62633 177 aaKnown RBP5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 GATD1Q8NB37 220 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 GTSF1Q8WW33 167 aa5.61□□□□□ -1.51
TNFRSF9-202ENST00000474475 UBE2L6O14933 153 aa5.6□□□□□ -1.51
TNFRSF9-202ENST00000474475 TAGLN2P37802 199 aaKnown RBP5.6□□□□□ -1.51
TNFRSF9-202ENST00000474475 FOXA3P55318 350 aaPredicted RBP5.6□□□□□ -1.51
TNFRSF9-202ENST00000474475 CIRBPQ14011 172 aaKnown RBP5.6□□□□□ -1.51
TNFRSF9-202ENST00000474475 COTL1Q14019 142 aa5.6□□□□□ -1.51
TNFRSF9-202ENST00000474475 RPL39LQ96EH5 51 aaKnown RBP5.6□□□□□ -1.51
TNFRSF9-202ENST00000474475 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
TNFRSF9-202ENST00000474475 Q6ZNX1 250 aa5.59□□□□□ -1.51
TNFRSF9-202ENST00000474475 C15orf56Q8N910 161 aa5.59□□□□□ -1.51
TNFRSF9-202ENST00000474475 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
TNFRSF9-202ENST00000474475 IGHV3-64A0A075B6Q5 118 aa5.58□□□□□ -1.52
TNFRSF9-202ENST00000474475 IGKV3OR2-268A0A0C4DH90 116 aa5.58□□□□□ -1.52
TNFRSF9-202ENST00000474475 PTTG1IPP53801 180 aa5.58□□□□□ -1.52
TNFRSF9-202ENST00000474475 SERTAD4-AS1Q5TG53 156 aa5.58□□□□□ -1.52
TNFRSF9-202ENST00000474475 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
TNFRSF9-202ENST00000474475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 IGKV2-29A2NJV5 120 aaPredicted RBP5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 TMEM250H0YL14 139 aa5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 GATCO43716 136 aaKnown RBP5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 GAS8-AS1O95177 125 aa5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 NCR2O95944 276 aa5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 ALKAL2Q6UX46 152 aa5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 FAM231DQ6ZW35 169 aa5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
TNFRSF9-202ENST00000474475 A0A087WYN8 130 aa5.56□□□□□ -1.52
TNFRSF9-202ENST00000474475 FAM231BA6NCW3 169 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms