RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CITED2Q99967 270 aaPredicted RBP13.65□□□□□ -0.22
ECHDC1-214ENST00000474289 NDUFA7O95182 113 aa13.65□□□□□ -0.22
ECHDC1-214ENST00000474289 IGKV3-20P01619 116 aa13.65□□□□□ -0.22
ECHDC1-214ENST00000474289 ID1P41134 155 aa13.64□□□□□ -0.23
ECHDC1-214ENST00000474289 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-214ENST00000474289 COL6A6A6NMZ7 2263 aa13.64□□□□□ -0.23
ECHDC1-214ENST00000474289 DNAJC30Q96LL9 226 aa13.64□□□□□ -0.23
ECHDC1-214ENST00000474289 TINCRA0A1B0GVN0 87 aa13.63□□□□□ -0.23
ECHDC1-214ENST00000474289 LINC00643Q86TS7 51 aa13.63□□□□□ -0.23
ECHDC1-214ENST00000474289 NRGNQ92686 78 aa13.63□□□□□ -0.23
ECHDC1-214ENST00000474289 K7ENP7 123 aa13.63□□□□□ -0.23
ECHDC1-214ENST00000474289 UQCRQO14949 82 aa13.63□□□□□ -0.23
ECHDC1-214ENST00000474289 SPTAN1Q13813 2472 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-214ENST00000474289 IGHV3OR16-10A0A075B7F0 116 aa13.62□□□□□ -0.23
ECHDC1-214ENST00000474289 TIMM17BO60830 172 aa13.62□□□□□ -0.23
ECHDC1-214ENST00000474289 IGHV1OR15-1A0A075B7D0 117 aa13.62□□□□□ -0.23
ECHDC1-214ENST00000474289 USMG5Q96IX5 58 aa13.62□□□□□ -0.23
ECHDC1-214ENST00000474289 AKAP6Q13023 2319 aa13.61□□□□□ -0.23
ECHDC1-214ENST00000474289 DOPEY2Q9Y3R5 2298 aa13.61□□□□□ -0.23
ECHDC1-214ENST00000474289 HERVK_113P63121 156 aa13.61□□□□□ -0.23
ECHDC1-214ENST00000474289 LINC00526Q96FQ7 95 aa13.61□□□□□ -0.23
ECHDC1-214ENST00000474289 VPS13CQ709C8 3753 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 LOC107984640A0A0U1RRK4 108 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 SORL1Q92673 2214 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 IGHV3-73A0A0B4J1V6 119 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 COX7A2LO14548 114 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 IGHG2P01859 326 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 PF4V1P10720 104 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 DAZ2Q13117 558 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 SDIM1Q6ZPB5 146 aa13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 DAZ4Q86SG3 579 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 DAZ3Q9NR90 486 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-214ENST00000474289 PROK1P58294 105 aa13.59□□□□□ -0.23
ECHDC1-214ENST00000474289 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
ECHDC1-214ENST00000474289 KLK5Q9Y337 293 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-214ENST00000474289 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-214ENST00000474289 ATRXP46100 2492 aa13.59□□□□□ -0.23
ECHDC1-214ENST00000474289 BPESC1Q9GZL8 116 aa13.58□□□□□ -0.24
ECHDC1-214ENST00000474289 UBE2D4Q9Y2X8 147 aa13.58□□□□□ -0.24
ECHDC1-214ENST00000474289 NDUFA1O15239 70 aa13.57□□□□□ -0.24
ECHDC1-214ENST00000474289 LINC00308Q8TCZ7 52 aa13.57□□□□□ -0.24
ECHDC1-214ENST00000474289 CDKN2A-AS1Q9UH64 79 aa13.57□□□□□ -0.24
ECHDC1-214ENST00000474289 COL12A1Q99715 3063 aa13.57□□□□□ -0.24
ECHDC1-214ENST00000474289 ATP5G1P05496 136 aa13.56□□□□□ -0.24
ECHDC1-214ENST00000474289 LMO4P61968 165 aa13.56□□□□□ -0.24
ECHDC1-214ENST00000474289 Q8N2B8 174 aa13.56□□□□□ -0.24
ECHDC1-214ENST00000474289 UBTD1Q9HAC8 227 aa13.56□□□□□ -0.24
ECHDC1-214ENST00000474289 Q9UF83 564 aa13.56□□□□□ -0.24
ECHDC1-214ENST00000474289 CHCHD7Q9BUK0 85 aa13.56□□□□□ -0.24
ECHDC1-214ENST00000474289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.55□□□□□ -0.24
ECHDC1-214ENST00000474289 IGKV2-29A2NJV5 120 aaPredicted RBP13.55□□□□□ -0.24
ECHDC1-214ENST00000474289 H3BUA1 57 aa13.55□□□□□ -0.24
ECHDC1-214ENST00000474289 BEAN1Q3B7T3 259 aa13.55□□□□□ -0.24
ECHDC1-214ENST00000474289 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
ECHDC1-214ENST00000474289 EDA2RQ9HAV5 297 aa13.55□□□□□ -0.24
ECHDC1-214ENST00000474289 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
ECHDC1-214ENST00000474289 C22orf24Q9Y442 160 aa13.54□□□□□ -0.24
ECHDC1-214ENST00000474289 CIRBPQ14011 172 aaKnown RBP13.54□□□□□ -0.24
ECHDC1-214ENST00000474289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.54□□□□□ -0.24
ECHDC1-214ENST00000474289 PEMTQ9UBM1 199 aa13.54□□□□□ -0.24
ECHDC1-214ENST00000474289 NACAE9PAV3 2078 aa13.54□□□□□ -0.24
ECHDC1-214ENST00000474289 A0A0U1RRA0 63 aa13.53□□□□□ -0.24
ECHDC1-214ENST00000474289 COX7CP15954 63 aa13.53□□□□□ -0.24
ECHDC1-214ENST00000474289 CXCL5P42830 114 aa13.53□□□□□ -0.24
ECHDC1-214ENST00000474289 LY6EQ16553 131 aa13.53□□□□□ -0.24
ECHDC1-214ENST00000474289 BAALC-AS2P0C853 105 aa13.53□□□□□ -0.24
ECHDC1-214ENST00000474289 MUC6Q6W4X9 2439 aa13.53□□□□□ -0.24
ECHDC1-214ENST00000474289 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.24
ECHDC1-214ENST00000474289 TIRAPP58753 221 aa13.52□□□□□ -0.24
ECHDC1-214ENST00000474289 ZNF625Q96I27 306 aaPredicted RBP13.52□□□□□ -0.24
ECHDC1-214ENST00000474289 LINC00467Q9BRT7 94 aa13.52□□□□□ -0.24
ECHDC1-214ENST00000474289 K7EMT4 169 aa13.52□□□□□ -0.25
ECHDC1-214ENST00000474289 TRACP01848 142 aa13.52□□□□□ -0.25
ECHDC1-214ENST00000474289 SOSTDC1Q6X4U4 206 aa13.52□□□□□ -0.25
ECHDC1-214ENST00000474289 C2orf48Q96LS8 159 aa13.52□□□□□ -0.25
ECHDC1-214ENST00000474289 Q9H8V8 135 aa13.52□□□□□ -0.25
ECHDC1-214ENST00000474289 J3KT08 172 aa13.51□□□□□ -0.25
ECHDC1-214ENST00000474289 SNRPD3P62318 126 aaKnown RBP13.51□□□□□ -0.25
ECHDC1-214ENST00000474289 LRRC75A-AS1Q8N1F1 130 aa13.51□□□□□ -0.25
ECHDC1-214ENST00000474289 KNCNA6PVL3 124 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 HTN1P15515 57 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 BLCAPP62952 87 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 FAM218AQ96MZ4 157 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 IGLV5-45A0A087WSX0 123 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 A0A1B0GX51 115 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 IGF2RP11717 2491 aa13.5□□□□□ -0.25
ECHDC1-214ENST00000474289 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 GAGE2AQ6NT46 116 aa13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 Q6ZSN1 163 aa13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 FAM19A5Q7Z5A7 132 aaPredicted RBP13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 RBMY1A1P0DJD3 496 aaKnown RBP13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 RBMY1CP0DJD4 496 aa13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 CRYGAP11844 174 aa13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 RBMY1FQ15415 496 aaKnown RBP13.49□□□□□ -0.25
ECHDC1-214ENST00000474289 COX6A2Q02221 97 aa13.48□□□□□ -0.25
ECHDC1-214ENST00000474289 IGHV3-38A0A0C4DH36 116 aa13.47□□□□□ -0.25
ECHDC1-214ENST00000474289 K7EQG2 157 aa13.47□□□□□ -0.25
ECHDC1-214ENST00000474289 C5orf47Q569G3 176 aa13.47□□□□□ -0.25
ECHDC1-214ENST00000474289 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms