RNA–Protein interactions for RNA: ENST00000474082.1

FAM3C-204, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-204ENST00000474082 ABCA3Q99758 1704 aa1.85□□□□□ -2.11
FAM3C-204ENST00000474082 SPAG17Q6Q759 2223 aa1.85□□□□□ -2.11
FAM3C-204ENST00000474082 POLQO75417 2590 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 BPTFQ12830 3046 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 FANCD2Q9BXW9 1451 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 NUP188Q5SRE5 1749 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 REV3LO60673 3130 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 NPC2P61916 151 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 GTF2H5Q6ZYL4 71 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 SPTSSBQ8NFR3 76 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 C10orf82Q8WW14 230 aa1.84□□□□□ -2.11
FAM3C-204ENST00000474082 RBBP6Q7Z6E9 1792 aaKnown RBP1.84□□□□□ -2.12
FAM3C-204ENST00000474082 CFAP46Q8IYW2 2715 aa1.84□□□□□ -2.12
FAM3C-204ENST00000474082 JMJD1CQ15652 2540 aa1.84□□□□□ -2.12
FAM3C-204ENST00000474082 ABCA8O94911 1581 aa1.84□□□□□ -2.12
FAM3C-204ENST00000474082 SHROOM2Q13796 1616 aa1.84□□□□□ -2.12
FAM3C-204ENST00000474082 TECTAO75443 2155 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 DLG5Q8TDM6 1919 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 WDFY4Q6ZS81 3184 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 TULP4Q9NRJ4 1543 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 CNOT1A5YKK6 2376 aaKnown RBP1.83□□□□□ -2.12
FAM3C-204ENST00000474082 AFDNP55196 1824 aaKnown RBP1.83□□□□□ -2.12
FAM3C-204ENST00000474082 TRBV10-3A0A0K0K1G6 114 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 SNRNP200O75643 2136 aaKnown RBP1.83□□□□□ -2.12
FAM3C-204ENST00000474082 KRTAP10-4P60372 401 aaPredicted RBP1.83□□□□□ -2.12
FAM3C-204ENST00000474082 C5orf56Q8N8D9 126 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 COL6A6A6NMZ7 2263 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 C3P01024 1663 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 CITO14578 2027 aa1.83□□□□□ -2.12
FAM3C-204ENST00000474082 OOSP1A8MZH6 123 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 RBM3P98179 157 aaKnown RBP1.82□□□□□ -2.12
FAM3C-204ENST00000474082 INSL4Q14641 139 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 LINC00575Q6W349 94 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 C8orf59Q8N0T1 100 aaPredicted RBP1.82□□□□□ -2.12
FAM3C-204ENST00000474082 SVBPQ8N300 66 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 LINC00208Q96KT6 92 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 CCL19Q99731 98 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 TNS1Q9HBL0 1735 aaKnown RBP1.82□□□□□ -2.12
FAM3C-204ENST00000474082 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 LRRC9Q6ZRR7 1453 aa1.82□□□□□ -2.12
FAM3C-204ENST00000474082 KIAA0100Q14667 2235 aaKnown RBP1.81□□□□□ -2.12
FAM3C-204ENST00000474082 EFNA4P52798 201 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 CAV3P56539 151 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 DEFB123Q8N688 67 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 DSCR8Q96T75 97 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 COA4Q9NYJ1 87 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 CELSR3Q9NYQ7 3312 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 PCNX1Q96RV3 2341 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 LRRK2Q5S007 2527 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 MAGI1Q96QZ7 1491 aaPredicted RBP1.81□□□□□ -2.12
FAM3C-204ENST00000474082 NCOA6Q14686 2063 aaPredicted RBP1.81□□□□□ -2.12
FAM3C-204ENST00000474082 SPEGQ15772 3267 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 KDM5DQ9BY66 1539 aa1.81□□□□□ -2.12
FAM3C-204ENST00000474082 USP34Q70CQ2 3546 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 PTPRZ1P23471 2315 aaPredicted RBP1.8□□□□□ -2.12
FAM3C-204ENST00000474082 KDM5AP29375 1690 aaKnown RBP1.8□□□□□ -2.12
FAM3C-204ENST00000474082 NWD2Q9ULI1 1742 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 CCDC168Q8NDH2 2452 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 DCHS1Q96JQ0 3298 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 CCL8P80075 99 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 HSD52Q0P140 79 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 Q86TA4 180 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 C4orf33Q8N1A6 199 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 PPP1R1CQ8WVI7 109 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
FAM3C-204ENST00000474082 RAPGEF2Q9Y4G8 1499 aa1.8□□□□□ -2.12
FAM3C-204ENST00000474082 TARBP1Q13395 1621 aaKnown RBP1.8□□□□□ -2.12
FAM3C-204ENST00000474082 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 HTTP42858 3142 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 TRBV30A0A0K0K1B3 111 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 IFITM1P13164 125 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ZNF56Q15929 161 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ZNF818PQ6ZRF7 136 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 MAGI3Q5TCQ9 1506 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ZFYVE16Q7Z3T8 1539 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ARHGEF12Q9NZN5 1544 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 CROCC2H7BZ55 1655 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 NRXN2Q9P2S2 1712 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ASCC3Q8N3C0 2202 aaKnown RBP1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ATRQ13535 2644 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 PRUNE2Q8WUY3 3088 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ASPMQ8IZT6 3477 aa1.79□□□□□ -2.12
FAM3C-204ENST00000474082 ZFYVE26Q68DK2 2539 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 NCOR2Q9Y618 2525 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 KIF14Q15058 1648 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 CPSF1Q10570 1443 aaKnown RBP1.78□□□□□ -2.12
FAM3C-204ENST00000474082 TRAV13-2A0A0B4J235 113 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 FXYD1O00168 92 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 CCL3L1P16619 93 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 UBE2D1P51668 147 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 C5orf38Q86SI9 138 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 C20orf197Q8N268 126 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 BET1LQ9NYM9 111 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 FBN2P35556 2912 aa1.78□□□□□ -2.12
FAM3C-204ENST00000474082 SPTBP11277 2137 aa1.78□□□□□ -2.13
FAM3C-204ENST00000474082 PLXNA1Q9UIW2 1896 aa1.77□□□□□ -2.13
FAM3C-204ENST00000474082 PARP14Q460N5 1801 aa1.77□□□□□ -2.13
FAM3C-204ENST00000474082 UBR4Q5T4S7 5183 aa1.77□□□□□ -2.13
FAM3C-204ENST00000474082 ANKHD1Q8IWZ3 2542 aaKnown RBP1.77□□□□□ -2.13
FAM3C-204ENST00000474082 CREBBPQ92793 2442 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms