RNA–Protein interactions for RNA: ENST00000474082.1

FAM3C-204, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-204ENST00000474082 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
FAM3C-204ENST00000474082 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
FAM3C-204ENST00000474082 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
FAM3C-204ENST00000474082 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
FAM3C-204ENST00000474082 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
FAM3C-204ENST00000474082 FOXD1Q16676 465 aa21.91■■□□□ 1.1
FAM3C-204ENST00000474082 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
FAM3C-204ENST00000474082 ADRA2BP18089 450 aa21.53■■□□□ 1.04
FAM3C-204ENST00000474082 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
FAM3C-204ENST00000474082 KCNA4P22459 653 aa20.39■□□□□ 0.85
FAM3C-204ENST00000474082 PPP4R3CPQ6ZMV5 832 aa20.22■□□□□ 0.83
FAM3C-204ENST00000474082 MSH5O43196 834 aa19.94■□□□□ 0.78
FAM3C-204ENST00000474082 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
FAM3C-204ENST00000474082 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
FAM3C-204ENST00000474082 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
FAM3C-204ENST00000474082 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
FAM3C-204ENST00000474082 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
FAM3C-204ENST00000474082 SLC4A1APQ9BWU0 796 aaKnown RBP19.48■□□□□ 0.71
FAM3C-204ENST00000474082 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
FAM3C-204ENST00000474082 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
FAM3C-204ENST00000474082 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
FAM3C-204ENST00000474082 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
FAM3C-204ENST00000474082 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
FAM3C-204ENST00000474082 HOXD11P31277 338 aaPredicted RBP18.81■□□□□ 0.6
FAM3C-204ENST00000474082 ZBTB22O15209 634 aa18.8■□□□□ 0.6
FAM3C-204ENST00000474082 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
FAM3C-204ENST00000474082 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.56
FAM3C-204ENST00000474082 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
FAM3C-204ENST00000474082 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
FAM3C-204ENST00000474082 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
FAM3C-204ENST00000474082 ATXN8OSP0DMR3 200 aa17.87■□□□□ 0.45
FAM3C-204ENST00000474082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
FAM3C-204ENST00000474082 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
FAM3C-204ENST00000474082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
FAM3C-204ENST00000474082 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
FAM3C-204ENST00000474082 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
FAM3C-204ENST00000474082 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
FAM3C-204ENST00000474082 APLP2Q06481 763 aa17.25■□□□□ 0.35
FAM3C-204ENST00000474082 FKBP8Q14318 412 aa17.21■□□□□ 0.35
FAM3C-204ENST00000474082 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
FAM3C-204ENST00000474082 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
FAM3C-204ENST00000474082 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
FAM3C-204ENST00000474082 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
FAM3C-204ENST00000474082 C1QBPQ07021 282 aaKnown RBP16.97■□□□□ 0.31
FAM3C-204ENST00000474082 CAPN15O75808 1086 aa16.9■□□□□ 0.3
FAM3C-204ENST00000474082 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
FAM3C-204ENST00000474082 POLA2Q14181 598 aa16.83■□□□□ 0.28
FAM3C-204ENST00000474082 FBLN2P98095 1184 aa16.72■□□□□ 0.27
FAM3C-204ENST00000474082 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
FAM3C-204ENST00000474082 ABCB7O75027 752 aa16.67■□□□□ 0.26
FAM3C-204ENST00000474082 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
FAM3C-204ENST00000474082 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
FAM3C-204ENST00000474082 DSG3P32926 999 aa16.54■□□□□ 0.24
FAM3C-204ENST00000474082 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
FAM3C-204ENST00000474082 PROM2Q8N271 834 aa16.52■□□□□ 0.24
FAM3C-204ENST00000474082 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
FAM3C-204ENST00000474082 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
FAM3C-204ENST00000474082 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
FAM3C-204ENST00000474082 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
FAM3C-204ENST00000474082 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
FAM3C-204ENST00000474082 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
FAM3C-204ENST00000474082 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
FAM3C-204ENST00000474082 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
FAM3C-204ENST00000474082 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
FAM3C-204ENST00000474082 IFNLR1Q8IU57 520 aaPredicted RBP16.06■□□□□ 0.16
FAM3C-204ENST00000474082 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
FAM3C-204ENST00000474082 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
FAM3C-204ENST00000474082 SLC24A1O60721 1099 aa15.88■□□□□ 0.13
FAM3C-204ENST00000474082 KLHL34Q8N239 644 aa15.77■□□□□ 0.12
FAM3C-204ENST00000474082 PLCD3Q8N3E9 789 aa15.76■□□□□ 0.11
FAM3C-204ENST00000474082 PKD2Q13563 968 aa15.74■□□□□ 0.11
FAM3C-204ENST00000474082 SPOCK2Q92563 424 aa15.74■□□□□ 0.11
FAM3C-204ENST00000474082 MIER1Q8N108 512 aa15.73■□□□□ 0.11
FAM3C-204ENST00000474082 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
FAM3C-204ENST00000474082 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
FAM3C-204ENST00000474082 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
FAM3C-204ENST00000474082 SPDYE1Q8NFV5 336 aaPredicted RBP15.56■□□□□ 0.08
FAM3C-204ENST00000474082 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
FAM3C-204ENST00000474082 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
FAM3C-204ENST00000474082 REM2Q8IYK8 340 aaPredicted RBP15.5■□□□□ 0.07
FAM3C-204ENST00000474082 ECM2O94769 699 aaPredicted RBP15.49■□□□□ 0.07
FAM3C-204ENST00000474082 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
FAM3C-204ENST00000474082 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
FAM3C-204ENST00000474082 CIZ1Q9ULV3 898 aaPredicted RBP15.39■□□□□ 0.05
FAM3C-204ENST00000474082 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
FAM3C-204ENST00000474082 RGL2O15211 777 aa15.37■□□□□ 0.05
FAM3C-204ENST00000474082 CREBZFQ9NS37 354 aa15.37■□□□□ 0.05
FAM3C-204ENST00000474082 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
FAM3C-204ENST00000474082 NUBP1P53384 320 aa15.32■□□□□ 0.04
FAM3C-204ENST00000474082 MNX1P50219 401 aaPredicted RBP15.31■□□□□ 0.04
FAM3C-204ENST00000474082 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
FAM3C-204ENST00000474082 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
FAM3C-204ENST00000474082 GSE1Q14687 1217 aa15.24■□□□□ 0.03
FAM3C-204ENST00000474082 BBXQ8WY36 941 aaPredicted RBP15.2■□□□□ 0.02
FAM3C-204ENST00000474082 DCAF8Q5TAQ9 597 aa15.18■□□□□ 0.02
FAM3C-204ENST00000474082 RNF25Q96BH1 459 aaPredicted RBP15.14■□□□□ 0.01
FAM3C-204ENST00000474082 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
FAM3C-204ENST00000474082 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
FAM3C-204ENST00000474082 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
FAM3C-204ENST00000474082 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms