RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 OR2D3Q8NGH3 330 aa6.18□□□□□ -1.42
MCF2L-223ENST00000473345 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
MCF2L-223ENST00000473345 A8MWV9 139 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 S100PP25815 95 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 RPL19P84098 196 aaKnown RBP6.17□□□□□ -1.42
MCF2L-223ENST00000473345 ENHOQ6UWT2 76 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 Q8N976 141 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 BTF3L4Q96K17 158 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
MCF2L-223ENST00000473345 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 URGCP-MRPS24S4R325 110 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 LRP2P98164 4655 aa6.17□□□□□ -1.42
MCF2L-223ENST00000473345 TGIF2-C20orf24A0A0A6YYL0 155 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 XKRY2A2RUG3 117 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 PRSS1P07477 247 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 KRTAP26-1Q6PEX3 210 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 RASL11AQ6T310 242 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 RMI2Q96E14 147 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 CHCHD7Q9BUK0 85 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
MCF2L-223ENST00000473345 A0A1B0GXF2 115 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 RHODO00212 210 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 SNAI2O43623 268 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 GZMBP10144 247 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 RAB5AP20339 215 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 CTRLP40313 264 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 WDR73Q6P4I2 378 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 ATP5L2Q7Z4Y8 100 aa6.15□□□□□ -1.42
MCF2L-223ENST00000473345 F2Z2F3 143 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 PHOX2AO14813 284 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 OR5AL1P0C617 328 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 ASIPP42127 132 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 COX19Q49B96 90 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 LYZL1Q6UWQ5 148 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 GATD1Q8NB37 220 aa6.14□□□□□ -1.43
MCF2L-223ENST00000473345 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 GRIFINA4D1Z8 144 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 USP17L23D6RBM5 183 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 ARMS2P0C7Q2 107 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 FER1L6-AS1Q8NA97 138 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 PGLYRP4Q96LB8 373 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 GNB1LQ9BYB4 327 aa6.13□□□□□ -1.43
MCF2L-223ENST00000473345 A0A087WWL8 130 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 TMSB15BA0A087X1C1 80 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 A0A1B0GW15 77 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 S100A4P26447 101 aaKnown RBP6.12□□□□□ -1.43
MCF2L-223ENST00000473345 PKIAP61925 76 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 SDIM1Q6ZPB5 146 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 TMEM136Q6ZRR5 245 aa6.12□□□□□ -1.43
MCF2L-223ENST00000473345 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 H3BVH4 76 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 MT-ND6P03923 174 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 SLPIP03973 132 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 RPS10P46783 165 aaKnown RBP6.11□□□□□ -1.43
MCF2L-223ENST00000473345 UBE2D3P61077 147 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 UBE2D2P62837 147 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 HBBP68871 147 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 RIGQ13278 110 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 MRPL54Q6P161 138 aaKnown RBP6.11□□□□□ -1.43
MCF2L-223ENST00000473345 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
MCF2L-223ENST00000473345 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 NTF3P20783 257 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 CACNG7P62955 275 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 Q0VG73 95 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
MCF2L-223ENST00000473345 FAM74A4Q5TZK3 123 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 Q6ZRU5 148 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 NTM-AS1Q6ZSK4 140 aa6.1□□□□□ -1.43
MCF2L-223ENST00000473345 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.1□□□□□ -1.43
MCF2L-223ENST00000473345 TRGC2P03986 189 aa6.09□□□□□ -1.43
MCF2L-223ENST00000473345 S100A8P05109 93 aa6.09□□□□□ -1.43
MCF2L-223ENST00000473345 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
MCF2L-223ENST00000473345 OR10AG1Q8NH19 301 aa6.09□□□□□ -1.43
MCF2L-223ENST00000473345 BORCS7Q96B45 105 aa6.09□□□□□ -1.43
MCF2L-223ENST00000473345 TMEM191AQ9H0A3 160 aa6.09□□□□□ -1.43
MCF2L-223ENST00000473345 A0A087WX48 190 aa6.08□□□□□ -1.44
MCF2L-223ENST00000473345 CAMPP49913 170 aa6.08□□□□□ -1.44
MCF2L-223ENST00000473345 FABP9Q0Z7S8 132 aa6.08□□□□□ -1.44
MCF2L-223ENST00000473345 C1orf43Q9BWL3 253 aa6.08□□□□□ -1.44
MCF2L-223ENST00000473345 MRPL18Q9H0U6 180 aaKnown RBP6.08□□□□□ -1.44
MCF2L-223ENST00000473345 TRAPPC1Q9Y5R8 145 aa6.08□□□□□ -1.44
MCF2L-223ENST00000473345 KIF25-AS1Q9Y6Z4 181 aa6.08□□□□□ -1.44
MCF2L-223ENST00000473345 TRBV6-8A0A0A6YYG3 113 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 MUC21A0A0G2JKD1 596 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 MUC21A0A140T8X8 626 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 C1orf196B1AJZ1 125 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 RPL36AP83881 106 aaKnown RBP6.07□□□□□ -1.44
MCF2L-223ENST00000473345 TWIST1Q15672 202 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 TMEM97Q5BJF2 176 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 ZFP82Q8N141 532 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 NEXN-AS1Q8NBZ9 246 aa6.07□□□□□ -1.44
MCF2L-223ENST00000473345 RPL36ALQ969Q0 106 aaKnown RBP6.07□□□□□ -1.44
MCF2L-223ENST00000473345 TPPP3Q9BW30 176 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms