RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 C9JAW5 83 aa15.48■□□□□ 0.07
COL18A1-207ENST00000473212 CEMP1Q6PRD7 247 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-207ENST00000473212 EPG5Q9HCE0 2579 aa15.48■□□□□ 0.07
COL18A1-207ENST00000473212 CHD6Q8TD26 2715 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 TRGV11A0A075B6L2 103 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 SLC25A20O43772 301 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 RNASE13Q5GAN3 156 aaKnown RBP15.47■□□□□ 0.07
COL18A1-207ENST00000473212 WNK1Q9H4A3 2382 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 NACAE9PAV3 2078 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 NF1P21359 2839 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 NAV2Q8IVL1 2488 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 A0A0B4J2C4 111 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 A0A0J9YXY3 114 aa15.47■□□□□ 0.07
COL18A1-207ENST00000473212 BEX4Q9NWD9 120 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-207ENST00000473212 M0R2P5 195 aa15.46■□□□□ 0.07
COL18A1-207ENST00000473212 CD28P10747 220 aa15.46■□□□□ 0.07
COL18A1-207ENST00000473212 IGHV3-30-3P0DP02 117 aa15.46■□□□□ 0.06
COL18A1-207ENST00000473212 SLURP1P55000 103 aa15.46■□□□□ 0.06
COL18A1-207ENST00000473212 Q1RN00 199 aa15.46■□□□□ 0.06
COL18A1-207ENST00000473212 FAM104AQ969W3 186 aa15.46■□□□□ 0.06
COL18A1-207ENST00000473212 SETD2Q9BYW2 2564 aaPredicted RBP15.45■□□□□ 0.06
COL18A1-207ENST00000473212 ELANEP08246 267 aa15.45■□□□□ 0.06
COL18A1-207ENST00000473212 USP24Q9UPU5 2620 aa15.44■□□□□ 0.06
COL18A1-207ENST00000473212 A0A096LNT2 108 aa15.44■□□□□ 0.06
COL18A1-207ENST00000473212 TRAV8-3A0A0A6YYJ7 113 aa15.44■□□□□ 0.06
COL18A1-207ENST00000473212 TIMM21Q9BVV7 248 aa15.44■□□□□ 0.06
COL18A1-207ENST00000473212 NIPBLQ6KC79 2804 aaeCLIP15.44■□□□□ 0.06
COL18A1-207ENST00000473212 LINC01356Q8N9X3 169 aa15.43■□□□□ 0.06
COL18A1-207ENST00000473212 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-207ENST00000473212 GEMIN7Q9H840 131 aaKnown RBP15.43■□□□□ 0.06
COL18A1-207ENST00000473212 ZNF702PQ9H963 129 aa15.43■□□□□ 0.06
COL18A1-207ENST00000473212 PRRC2AP48634 2157 aaKnown RBP15.42■□□□□ 0.06
COL18A1-207ENST00000473212 RBMY1BA6NDE4 496 aaKnown RBP15.42■□□□□ 0.06
COL18A1-207ENST00000473212 RBMY1EA6NEQ0 496 aaKnown RBP15.42■□□□□ 0.06
COL18A1-207ENST00000473212 RBMY1DP0C7P1 496 aaKnown RBP15.42■□□□□ 0.06
COL18A1-207ENST00000473212 DEFB131AP59861 70 aa15.42■□□□□ 0.06
COL18A1-207ENST00000473212 PYGO1Q9Y3Y4 419 aa15.42■□□□□ 0.06
COL18A1-207ENST00000473212 TMEM89A2RUT3 159 aa15.41■□□□□ 0.06
COL18A1-207ENST00000473212 MRPS36P82909 103 aaKnown RBP15.41■□□□□ 0.06
COL18A1-207ENST00000473212 Q6ZSN1 163 aa15.41■□□□□ 0.06
COL18A1-207ENST00000473212 PRSS2P07478 247 aa15.41■□□□□ 0.06
COL18A1-207ENST00000473212 LITAFQ99732 161 aa15.41■□□□□ 0.06
COL18A1-207ENST00000473212 TNFRSF18Q9Y5U5 241 aa15.41■□□□□ 0.06
COL18A1-207ENST00000473212 PRB1P04280 392 aa15.4■□□□□ 0.06
COL18A1-207ENST00000473212 NBPF19A0A087WUL8 3843 aa15.4■□□□□ 0.06
COL18A1-207ENST00000473212 RNF152Q8N8N0 203 aa15.4■□□□□ 0.06
COL18A1-207ENST00000473212 VPREB3Q9UKI3 123 aa15.4■□□□□ 0.06
COL18A1-207ENST00000473212 ADAMTSL4-AS1Q5T5F5 129 aa15.39■□□□□ 0.05
COL18A1-207ENST00000473212 C2CD3Q4AC94 2353 aa15.38■□□□□ 0.05
COL18A1-207ENST00000473212 A8MZ25 164 aa15.38■□□□□ 0.05
COL18A1-207ENST00000473212 GATA3P23771 443 aa15.38■□□□□ 0.05
COL18A1-207ENST00000473212 ATXN8Q156A1 80 aa15.38■□□□□ 0.05
COL18A1-207ENST00000473212 EDA2RQ9HAV5 297 aa15.38■□□□□ 0.05
COL18A1-207ENST00000473212 IGHV1-58A0A0C4DH39 117 aa15.37■□□□□ 0.05
COL18A1-207ENST00000473212 TRIAP1O43715 76 aa15.37■□□□□ 0.05
COL18A1-207ENST00000473212 LINC01620Q4KN68 170 aa15.37■□□□□ 0.05
COL18A1-207ENST00000473212 M0QXV9 152 aa15.37■□□□□ 0.05
COL18A1-207ENST00000473212 CR1P17927 2039 aa15.37■□□□□ 0.05
COL18A1-207ENST00000473212 NTN5Q8WTR8 489 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-207ENST00000473212 NDUFA12Q9UI09 145 aa15.37■□□□□ 0.05
COL18A1-207ENST00000473212 TMEM262E9PQX1 116 aa15.36■□□□□ 0.05
COL18A1-207ENST00000473212 NPC2P61916 151 aa15.36■□□□□ 0.05
COL18A1-207ENST00000473212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-207ENST00000473212 TRAV26-1A0A087WT03 109 aa15.36■□□□□ 0.05
COL18A1-207ENST00000473212 IGKV2-29A2NJV5 120 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-207ENST00000473212 KRTAP10-9P60411 292 aa15.36■□□□□ 0.05
COL18A1-207ENST00000473212 IGHV3-38A0A0C4DH36 116 aa15.35■□□□□ 0.05
COL18A1-207ENST00000473212 TMEM61Q8N0U2 210 aa15.35■□□□□ 0.05
COL18A1-207ENST00000473212 UBE2E2Q96LR5 201 aa15.35■□□□□ 0.05
COL18A1-207ENST00000473212 CHCHD7Q9BUK0 85 aa15.35■□□□□ 0.05
COL18A1-207ENST00000473212 JMJD1CQ15652 2540 aa15.35■□□□□ 0.05
COL18A1-207ENST00000473212 TRBV30A0A0K0K1B3 111 aa15.34■□□□□ 0.05
COL18A1-207ENST00000473212 VSIG2Q96IQ7 327 aa15.34■□□□□ 0.05
COL18A1-207ENST00000473212 CCDC168Q8NDH2 2452 aa15.34■□□□□ 0.05
COL18A1-207ENST00000473212 H3BMM0 161 aa15.34■□□□□ 0.05
COL18A1-207ENST00000473212 Q6YL49 198 aa15.34■□□□□ 0.05
COL18A1-207ENST00000473212 UBE2D4Q9Y2X8 147 aa15.34■□□□□ 0.05
COL18A1-207ENST00000473212 Q6ZSV7 163 aa15.33■□□□□ 0.04
COL18A1-207ENST00000473212 TINCRA0A1B0GVN0 87 aa15.33■□□□□ 0.04
COL18A1-207ENST00000473212 KHDC1LQ5JSQ8 128 aa15.33■□□□□ 0.04
COL18A1-207ENST00000473212 SPANXDQ9BXN6 97 aa15.32■□□□□ 0.04
COL18A1-207ENST00000473212 SPANXCQ9NY87 97 aa15.32■□□□□ 0.04
COL18A1-207ENST00000473212 LINC00467Q9BRT7 94 aa15.32■□□□□ 0.04
COL18A1-207ENST00000473212 TEX49A0A1B0GTD5 131 aa15.31■□□□□ 0.04
COL18A1-207ENST00000473212 MIAQ16674 131 aa15.31■□□□□ 0.04
COL18A1-207ENST00000473212 ICOSQ9Y6W8 199 aa15.31■□□□□ 0.04
COL18A1-207ENST00000473212 DSCR9P59020 149 aa15.31■□□□□ 0.04
COL18A1-207ENST00000473212 CLUHP3Q96NS8 147 aa15.31■□□□□ 0.04
COL18A1-207ENST00000473212 SPANXA1Q9NS26 97 aa15.31■□□□□ 0.04
COL18A1-207ENST00000473212 TRBV10-2A0A0K0K1G8 114 aa15.3■□□□□ 0.04
COL18A1-207ENST00000473212 Q5PR19 223 aa15.3■□□□□ 0.04
COL18A1-207ENST00000473212 IGHV4-31P0DP07 118 aa15.3■□□□□ 0.04
COL18A1-207ENST00000473212 ZNF415Q09FC8 603 aa15.3■□□□□ 0.04
COL18A1-207ENST00000473212 ZFAND6Q6FIF0 208 aa15.29■□□□□ 0.04
COL18A1-207ENST00000473212 RNF183Q96D59 192 aa15.28■□□□□ 0.04
COL18A1-207ENST00000473212 FSHBP01225 129 aa15.28■□□□□ 0.04
COL18A1-207ENST00000473212 APCP25054 2843 aa15.28■□□□□ 0.04
COL18A1-207ENST00000473212 A8MTW9 85 aa15.27■□□□□ 0.04
COL18A1-207ENST00000473212 TEX29Q8N6K0 151 aa15.27■□□□□ 0.04
COL18A1-207ENST00000473212 DAND5Q8N907 189 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms