RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 VSIG2Q96IQ7 327 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 LINC00479Q96M42 142 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 IMMP2LQ96T52 175 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 SIGMAR1Q99720 223 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 UPK3BQ9BT76 320 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 MANBALQ9NQG1 85 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 GNG13Q9P2W3 67 aa3.95□□□□□ -1.78
VARS-222ENST00000470953 TRAV9-2A0A087WT02 112 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 SCO2A0A1W2PP80 73 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 A8MWV9 139 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 K7EQD1 137 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 SH2D1AO60880 128 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 IGLV2-11P01706 119 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 ESDP10768 282 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 EVI2AP22794 236 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 FHL2Q14192 279 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 ESRGQ1W209 222 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 ZNF506Q5JVG8 444 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 FAM74A4Q5TZK3 123 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 TEX43Q6ZNM6 134 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 BOD1L2Q8IYS8 172 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 ZC2HC1AQ96GY0 325 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 PHLDA3Q9Y5J5 127 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 LY96Q9Y6Y9 160 aa3.94□□□□□ -1.78
VARS-222ENST00000470953 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 GRIFINA4D1Z8 144 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 M0R381 172 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 RHODO00212 210 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 SNAI2O43623 268 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 LTAP01374 205 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 MGST1P10620 155 aaKnown RBP3.93□□□□□ -1.78
VARS-222ENST00000470953 GATA1P15976 413 aaPredicted RBP3.93□□□□□ -1.78
VARS-222ENST00000470953 RPL32P62910 135 aaKnown RBP3.93□□□□□ -1.78
VARS-222ENST00000470953 GAGE5Q13069 117 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 GAGE6Q13070 117 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 OR10J3Q5JRS4 329 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 CFAP126Q5VTH2 177 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 BAGE2Q86Y30 109 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 LYPD6BQ8NI32 183 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 C9orf85Q96MD7 179 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 TMEM242Q9NWH2 141 aa3.93□□□□□ -1.78
VARS-222ENST00000470953 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 TRBV24-1A0A075B6N3 115 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 LOC100131303A0A0U1RQF7 123 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 RS1O15537 224 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 PSCAO43653 123 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 ARMS2P0C7Q2 107 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 RNASE3P12724 160 aaKnown RBP3.92□□□□□ -1.78
VARS-222ENST00000470953 ZNF56Q15929 161 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 SPANXN1Q5VSR9 72 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 KCNIP4Q6PIL6 250 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 LYPD5Q6UWN5 251 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 C10orf126Q8N4M7 172 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 MBD3L1Q8WWY6 194 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 SPANXCQ9NY87 97 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 IL36BQ9NZH7 164 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 C11orf21Q9P2W6 132 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
VARS-222ENST00000470953 A0A087WWL8 130 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 IGLV5-52A0A0A0MRZ9 124 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 IGKV3D-20A0A0C4DH25 116 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 TRBV6-1A0A0K0K1D8 114 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 TRBV6-4A0A1B0GX49 114 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 GAGE12JA6NER3 117 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 J3QR89 54 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 CRYGDP07320 174 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 TRGC1P0CF51 173 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 BCL2P10415 239 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 GNG4P50150 75 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 SULT1A2P50226 295 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 MEF2BQ02080 365 aaPredicted RBP3.91□□□□□ -1.78
VARS-222ENST00000470953 GAGE4Q13068 117 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 LINC01559Q495D7 138 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 GAGE13Q4V321 117 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 CENPWQ5EE01 88 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 WFDC10BQ8IUB3 73 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 SLC25A29Q8N8R3 303 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 ATP6V0E2Q8NHE4 81 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 BTF3L4Q96K17 158 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 AP1S3Q96PC3 154 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 PARLQ9H300 379 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 LAMTOR2Q9Y2Q5 125 aa3.91□□□□□ -1.78
VARS-222ENST00000470953 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
VARS-222ENST00000470953 TRAV1-1A0A0B4J248 108 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 F5H697 171 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 ELOBQ15370 118 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 PIK3CD-AS1Q5SR53 167 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 ZFP2Q6ZN57 461 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 Q6ZSA8 131 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 FA2HQ7L5A8 372 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 FER1L6-AS1Q8NA97 138 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 Q9HAA7 133 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 MSRB1Q9NZV6 116 aa3.9□□□□□ -1.79
VARS-222ENST00000470953 MUC21A0A0G2JKD1 596 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 MUC21A0A140T8X8 626 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 P01737 135 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
VARS-222ENST00000470953 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms