RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 VAMP3Q15836 100 aa6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 SMIM15Q7Z3B0 74 aa6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 RNF185Q96GF1 192 aa6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 LINC00588Q9Y4M8 146 aa6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
SYNGAP1-205ENST00000470232 TRAV8-2A0A0B4J237 113 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 F5H768 121 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 CCL25O15444 150 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 ID1P41134 155 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 ANKRD39Q53RE8 183 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 C16orf92Q96LL3 132 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 AGPAT4-IT1Q9H0P7 198 aa6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 NXT2Q9NPJ8 142 aaKnown RBP6.21□□□□□ -1.42
SYNGAP1-205ENST00000470232 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 IGKV3-20P01619 116 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 ATP5G1P05496 136 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 FCER1GP30273 86 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 LEPP41159 167 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 TMEM97Q5BJF2 176 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 XP32Q5T750 250 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 Q6ZSN1 163 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 OR4C5Q8NGB2 326 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 CNFNQ9BYD5 112 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 PPP1R14DQ9NXH3 145 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 MSRB1Q9NZV6 116 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 U3KQE9 123 aa6.2□□□□□ -1.42
SYNGAP1-205ENST00000470232 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 SNAI2O43623 268 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 EVI2AP22794 236 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 FOXI2Q6ZQN5 318 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 ERASQ7Z444 233 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 Q8N3U1 123 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 Q8N8P6 123 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 GLMPQ8WWB7 406 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 CBY1Q9Y3M2 126 aa6.19□□□□□ -1.42
SYNGAP1-205ENST00000470232 IGKV3D-20A0A0C4DH25 116 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 LINC01546A6NGU7 62 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 ATP5LO75964 103 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 FGF6P10767 208 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 SEC11AP67812 179 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 HSD52Q0P140 79 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 SPANXN1Q5VSR9 72 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 C9orf47Q6ZRZ4 202 aa6.18□□□□□ -1.42
SYNGAP1-205ENST00000470232 A6NDN8 102 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 SIVA1O15304 175 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 NMUP48645 174 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 BOD1L2Q8IYS8 172 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 C1orf158Q8N1D5 194 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 C20orf173Q96LM9 149 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
SYNGAP1-205ENST00000470232 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 H3BVH4 76 aa6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 GAS8-AS1O95177 125 aa6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 PRSS1P07477 247 aa6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 LINC00477Q96M19 166 aa6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 LENEPQ9Y5L5 61 aa6.16□□□□□ -1.42
SYNGAP1-205ENST00000470232 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 C7orf71A4D174 169 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 H3BRM9 83 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 J3KRW8 73 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 K7EP13 123 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 DPM2O94777 84 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 IGKCP01834 107 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 ASIPP42127 132 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 LAGE3Q14657 143 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 ODF1Q14990 250 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 PRR9Q5T870 116 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 NRACQ8N912 160 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 MRAP2Q96G30 205 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 KRTAP1-5Q9BYS1 174 aa6.15□□□□□ -1.42
SYNGAP1-205ENST00000470232 PRSS47A8MTI9 375 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 GCSHP23434 173 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 S100A4P26447 101 aaKnown RBP6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 LINC00315P59091 139 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 SAMD13Q5VXD3 122 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 NFE4Q86UQ8 179 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 PLA2G2DQ9UNK4 145 aa6.14□□□□□ -1.43
SYNGAP1-205ENST00000470232 TRAV8-6A0A0B4J262 113 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 TRAV26-2A0A0B4J265 109 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 INSP01308 110 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 MGPP08493 103 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 SMIM17P0DL12 118 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
SYNGAP1-205ENST00000470232 ESRGQ1W209 222 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms