RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 UBE2L6O14933 153 aa7.09□□□□□ -1.27
COL4A3-204ENST00000469504 BCL2P10415 239 aa7.09□□□□□ -1.27
COL4A3-204ENST00000469504 CNBPP62633 177 aaKnown RBP7.09□□□□□ -1.27
COL4A3-204ENST00000469504 MED9Q9NWA0 146 aa7.09□□□□□ -1.27
COL4A3-204ENST00000469504 TMA7Q9Y2S6 64 aaKnown RBP7.09□□□□□ -1.27
COL4A3-204ENST00000469504 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
COL4A3-204ENST00000469504 NTF3P20783 257 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 CTRLP40313 264 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 NKX2-5P52952 324 aaPredicted RBP7.08□□□□□ -1.28
COL4A3-204ENST00000469504 RPL37AP61513 92 aaKnown RBP7.08□□□□□ -1.28
COL4A3-204ENST00000469504 COTL1Q14019 142 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 SLC51BQ86UW2 128 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 TCTE3Q8IZS6 198 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 C20orf203Q8NBC4 194 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 AP5S1Q9NUS5 200 aa7.08□□□□□ -1.28
COL4A3-204ENST00000469504 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
COL4A3-204ENST00000469504 RAB19A4D1S5 217 aa7.07□□□□□ -1.28
COL4A3-204ENST00000469504 CLPSL2Q6UWE3 100 aa7.07□□□□□ -1.28
COL4A3-204ENST00000469504 TEX261Q6UWH6 196 aa7.07□□□□□ -1.28
COL4A3-204ENST00000469504 RNF185Q96GF1 192 aa7.07□□□□□ -1.28
COL4A3-204ENST00000469504 FAM210AQ96ND0 272 aa7.07□□□□□ -1.28
COL4A3-204ENST00000469504 H7C423 109 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 NCR2O95944 276 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 AMTP48728 403 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 CIRBPQ14011 172 aaKnown RBP7.06□□□□□ -1.28
COL4A3-204ENST00000469504 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 SDIM1Q6ZPB5 146 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 SMIM15Q7Z3B0 74 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
COL4A3-204ENST00000469504 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
COL4A3-204ENST00000469504 IGHV3-64A0A075B6Q5 118 aa7.05□□□□□ -1.28
COL4A3-204ENST00000469504 hDV102S1A0JD36 115 aa7.05□□□□□ -1.28
COL4A3-204ENST00000469504 TWIST1Q15672 202 aa7.05□□□□□ -1.28
COL4A3-204ENST00000469504 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
COL4A3-204ENST00000469504 IGLV10-54A0A075B6I4 117 aa7.04□□□□□ -1.28
COL4A3-204ENST00000469504 TMEM250H0YL14 139 aa7.04□□□□□ -1.28
COL4A3-204ENST00000469504 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
COL4A3-204ENST00000469504 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
COL4A3-204ENST00000469504 CT83Q5H943 113 aa7.03□□□□□ -1.28
COL4A3-204ENST00000469504 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
COL4A3-204ENST00000469504 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
COL4A3-204ENST00000469504 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.03□□□□□ -1.28
COL4A3-204ENST00000469504 NDUFS6O75380 124 aaKnown RBP7.02□□□□□ -1.29
COL4A3-204ENST00000469504 ZNF25P17030 456 aaPredicted RBP7.02□□□□□ -1.29
COL4A3-204ENST00000469504 BLOC1S1P78537 153 aa7.02□□□□□ -1.29
COL4A3-204ENST00000469504 AMMECR1LQ6DCA0 310 aa7.02□□□□□ -1.29
COL4A3-204ENST00000469504 Q6ZRU5 148 aa7.02□□□□□ -1.29
COL4A3-204ENST00000469504 FAM231DQ6ZW35 169 aa7.02□□□□□ -1.29
COL4A3-204ENST00000469504 OCC1Q8TAD7 63 aa7.02□□□□□ -1.29
COL4A3-204ENST00000469504 RNASE7Q9H1E1 156 aaKnown RBP7.02□□□□□ -1.29
COL4A3-204ENST00000469504 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
COL4A3-204ENST00000469504 A8MWL6 223 aa7.01□□□□□ -1.29
COL4A3-204ENST00000469504 K7EN84 100 aa7.01□□□□□ -1.29
COL4A3-204ENST00000469504 APCSP02743 223 aa7.01□□□□□ -1.29
COL4A3-204ENST00000469504 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
COL4A3-204ENST00000469504 GFRA4Q9GZZ7 299 aa7.01□□□□□ -1.29
COL4A3-204ENST00000469504 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
COL4A3-204ENST00000469504 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
COL4A3-204ENST00000469504 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
COL4A3-204ENST00000469504 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
COL4A3-204ENST00000469504 SPACA4Q8TDM5 124 aa7□□□□□ -1.29
COL4A3-204ENST00000469504 GTSF1Q8WW33 167 aa7□□□□□ -1.29
COL4A3-204ENST00000469504 BORCS7Q96B45 105 aa7□□□□□ -1.29
COL4A3-204ENST00000469504 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 FAM231BA6NCW3 169 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 PANO1I0J062 215 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 I3L3M4 83 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 RPS10P46783 165 aaKnown RBP6.99□□□□□ -1.29
COL4A3-204ENST00000469504 Q6ZNX1 250 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 LYPD6BQ8NI32 183 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 DPH3Q96FX2 82 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 TMEM101Q96IK0 257 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 BTF3L4Q96K17 158 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
COL4A3-204ENST00000469504 A0A087WYN8 130 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 GVQW2A0A096LPI5 108 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-204ENST00000469504 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 SLPIP03973 132 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 FGF6P10767 208 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 RNASEKQ6P5S7 137 aaKnown RBP6.98□□□□□ -1.29
COL4A3-204ENST00000469504 OR5A1Q8NGJ0 315 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 CHCHD10Q8WYQ3 142 aaPredicted RBP6.98□□□□□ -1.29
COL4A3-204ENST00000469504 RPL39LQ96EH5 51 aaKnown RBP6.98□□□□□ -1.29
COL4A3-204ENST00000469504 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
COL4A3-204ENST00000469504 hCG_2014768A0A024R1R8 64 aa6.97□□□□□ -1.29
COL4A3-204ENST00000469504 PMCHP20382 165 aa6.97□□□□□ -1.29
COL4A3-204ENST00000469504 AKAP14Q86UN6 197 aa6.97□□□□□ -1.29
COL4A3-204ENST00000469504 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
COL4A3-204ENST00000469504 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
COL4A3-204ENST00000469504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.96□□□□□ -1.3
COL4A3-204ENST00000469504 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 A0A1B0GUT8 65 aa6.96□□□□□ -1.3
COL4A3-204ENST00000469504 IGKV2-29A2NJV5 120 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms