RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 TRAV12-3A0A0B4J271 114 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 CTXND1A0A1B0GTU2 59 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 MAP1LC3B2A6NCE7 125 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 MT1EP04732 61 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 CSN2P05814 226 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 COTL1Q14019 142 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 AKR1C8PQ5T2L2 129 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 MT1MQ8N339 61 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 Q8N8P6 123 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 BORCS8Q96FH0 119 aa-2.37□□□□□ -2.79
SSB-208ENST00000468600 LYRM2Q9NU23 88 aaPredicted RBP-2.37□□□□□ -2.79
SSB-208ENST00000468600 MRC1P22897 1456 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 TRBV27A0A0K0K1C4 114 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 LSM3P62310 102 aaKnown RBP-2.38□□□□□ -2.79
SSB-208ENST00000468600 SPA17Q15506 151 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 HRCT1Q6UXD1 115 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 NDUFAF1Q9Y375 327 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 TRRAPQ9Y4A5 3859 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 DNAH8Q96JB1 4490 aa-2.38□□□□□ -2.79
SSB-208ENST00000468600 MT2AP02795 61 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 LTC4SQ16873 150 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 HEPN1Q6WQI6 88 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 SLC25A26Q70HW3 274 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 OR51A4Q8NGJ6 313 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 TAS2R8Q9NYW2 309 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 ADCY9O60503 1353 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 TCOF1Q13428 1488 aaKnown RBP-2.39□□□□□ -2.79
SSB-208ENST00000468600 LRRC37A2A6NM11 1700 aa-2.39□□□□□ -2.79
SSB-208ENST00000468600 ARFGEF1Q9Y6D6 1849 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 MYOM3Q5VTT5 1437 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 TRAV2A0A0B4J234 112 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 M0R135 149 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 COX17Q14061 63 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 CROCCP2Q86T23 111 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 STX19Q8N4C7 294 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 OTOSQ8NHW6 89 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 MT1LQ93083 61 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 NDUFA4L2Q9NRX3 87 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 R4GMQ9 66 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 NRXN2Q9P2S2 1712 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 PARP14Q460N5 1801 aa-2.4□□□□□ -2.79
SSB-208ENST00000468600 PCF11O94913 1555 aaKnown RBP-2.4□□□□□ -2.79
SSB-208ENST00000468600 FMN2Q9NZ56 1722 aa-2.41□□□□□ -2.8
SSB-208ENST00000468600 TRAV30A0A087WSZ9 112 aa-2.41□□□□□ -2.8
SSB-208ENST00000468600 PPP1R2P41236 205 aa-2.41□□□□□ -2.8
SSB-208ENST00000468600 RPS28P62857 69 aaKnown RBP-2.41□□□□□ -2.8
SSB-208ENST00000468600 C9orf116Q5BN46 136 aaPredicted RBP-2.41□□□□□ -2.8
SSB-208ENST00000468600 NDUFA12Q9UI09 145 aa-2.41□□□□□ -2.8
SSB-208ENST00000468600 PAPPA2Q9BXP8 1791 aa-2.41□□□□□ -2.8
SSB-208ENST00000468600 PIRTP0C851 137 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 PHB2Q99623 299 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 STOML2Q9UJZ1 356 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 PLB1Q6P1J6 1458 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 SETBP1Q9Y6X0 1596 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 SBF2Q86WG5 1849 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 KIAA0556O60303 1618 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 CCDC171Q6TFL3 1326 aa-2.42□□□□□ -2.8
SSB-208ENST00000468600 ANKRD31Q8N7Z5 1873 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 A0A087WVE0 104 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 PNMA8CA0A1B0GUJ8 204 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 I3L3M4 83 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 FGF7P21781 194 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 PCBD1P61457 104 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 MRPS15P82914 257 aaKnown RBP-2.43□□□□□ -2.8
SSB-208ENST00000468600 SCIMPQ6UWF3 145 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 WFDC13Q8IUB5 93 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 DYNLRB2Q8TF09 96 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 CRIPTQ9P021 101 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 UFC1Q9Y3C8 167 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 WDR97A6NE52 1622 aa-2.43□□□□□ -2.8
SSB-208ENST00000468600 LINC00959A0A1B0GUT2 108 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 TRDV1A0A1B0GX56 115 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 PPP5D1E7EU14 171 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 CCDC179H3BU77 68 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 PGRMC1O00264 195 aaKnown RBP-2.44□□□□□ -2.8
SSB-208ENST00000468600 SDC2P34741 201 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 CDC42SE2Q9NRR3 84 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 SS18L2Q9UHA2 77 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 CICQ96RK0 1608 aaPredicted RBP-2.44□□□□□ -2.8
SSB-208ENST00000468600 DMXL2Q8TDJ6 3036 aa-2.44□□□□□ -2.8
SSB-208ENST00000468600 GABARAPH6UMI1 98 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 PPP1R17O96001 155 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 CMPK1P30085 196 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 CCL18P55774 89 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 PLGLB1Q02325 96 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 TMED2Q15363 201 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 LINC00305Q7Z4B0 112 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 MRPL40Q9NQ50 206 aaKnown RBP-2.45□□□□□ -2.8
SSB-208ENST00000468600 CDKN2A-AS1Q9UH64 79 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 ADGBQ8N7X0 1667 aa-2.45□□□□□ -2.8
SSB-208ENST00000468600 TRAV13-1A0A0B4J241 112 aa-2.46□□□□□ -2.8
SSB-208ENST00000468600 CLPSL1A2RUU4 121 aa-2.46□□□□□ -2.8
SSB-208ENST00000468600 H3BMG7 143 aa-2.46□□□□□ -2.8
SSB-208ENST00000468600 S100A6P06703 90 aa-2.46□□□□□ -2.8
SSB-208ENST00000468600 HSD17B12Q53GQ0 312 aa-2.46□□□□□ -2.8
SSB-208ENST00000468600 BPTFQ12830 3046 aa-2.46□□□□□ -2.8
SSB-208ENST00000468600 TECPR2O15040 1411 aa-2.47□□□□□ -2.8
SSB-208ENST00000468600 A6NIN4 97 aa-2.47□□□□□ -2.8
SSB-208ENST00000468600 YPEL1O60688 119 aa-2.47□□□□□ -2.8
SSB-208ENST00000468600 ATG12O94817 140 aa-2.47□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms