RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 IAPPP10997 89 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 HIST1H1BP16401 226 aaKnown RBP2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 EDDM3BP56851 147 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF660Q6AZW8 331 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 ALKAL2Q6UX46 152 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 ADM2Q7Z4H4 148 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 SIGLECL1Q8N7X8 197 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 OR2T35Q8NGX2 323 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 SMCR5Q8TEV8 140 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 PP6455Q8WZ26 134 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 MUCL1Q96DR8 90 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 CIB3Q96Q77 187 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 IMMP2LQ96T52 175 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 TAS2R8Q9NYW2 309 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 ABCA2Q9BZC7 2435 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 TNCP24821 2201 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 CELSR1Q9NYQ6 3014 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 TLN1Q9Y490 2541 aaKnown RBP2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 VPS13CQ709C8 3753 aa2.22□□□□□ -2.05
HMGB1P25-201ENST00000468402 ADGRG4Q8IZF6 3080 aa2.21□□□□□ -2.05
HMGB1P25-201ENST00000468402 A8MUU9 505 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 IQCF6A8MYZ5 107 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 MCRIP1C9JLW8 97 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 E7EQL1 145 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 G3V3Q6 166 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 H3BPC8 53 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 YPEL1O60688 119 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 MPC2O95563 127 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 RBP4P02753 201 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 TCRAP04437 139 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 APELAP0DMC3 54 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 PYYP10082 97 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 HLA-DRB4P13762 266 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 CCL3L1P16619 93 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 CD24P25063 80 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 FAUP35544 74 aaKnown RBP2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 FOXA3P55318 350 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 TPPP2P59282 170 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 SUPT4H1P63272 117 aaKnown RBP2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 RPL39P5Q59GN2 51 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 IGFL3Q6UXB1 125 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 ZNF818PQ6ZRF7 136 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 C9orf62Q8N4C0 152 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 OR10P1Q8NGE3 313 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 CLDND2Q8NHS1 167 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 DYNLRB1Q9NP97 96 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 SCP2D1Q9UJQ7 156 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 HLA-DRB4X5D2U9 266 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 NAV3Q8IVL0 2385 aa2.21□□□□□ -2.06
HMGB1P25-201ENST00000468402 DOPEY2Q9Y3R5 2298 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 MAP1AP78559 2803 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 IGKV1D-17A0A075B6S4 117 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRAV30A0A087WSZ9 112 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 NAP1L6A6NFF2 107 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 FAM24AA6NFZ4 105 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 SSSCA1O60232 199 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 SFT2D2O95562 160 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 HBDP02042 147 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 XCL1P47992 114 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 DEFA5Q01523 94 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 KLRD1Q13241 179 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 MOBPQ13875 183 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 DIAPH2-AS1Q14236 149 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 TMEM155Q4W5P6 130 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 LINC01545Q5VT33 79 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 Q5XG85 94 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 LCN15Q6UWW0 184 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 SDIM1Q6ZPB5 146 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 TMEM136Q6ZRR5 245 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 ZC2HC1AQ96GY0 325 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 GAFA1Q96PS6 74 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 MPC1Q9Y5U8 109 aa2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 ASH1LQ9NR48 2969 aaKnown RBP2.2□□□□□ -2.06
HMGB1P25-201ENST00000468402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 ABCA1O95477 2261 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 IGSF10Q6WRI0 2623 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 TRAV3A0A0B4J244 114 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 C19orf71A6NCJ1 209 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 C17orf98A8MV24 154 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 C3orf84H3BNL1 204 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 K7ERJ3 54 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 PPYP01298 95 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 IL5P05113 134 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 SLC25A5P05141 298 aaKnown RBP2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 FXYD2P54710 66 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 COL5A1-AS1Q5SY13 56 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 NCMAPQ5T1S8 102 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 SOSTDC1Q6X4U4 206 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 LINC00299Q6ZSB3 139 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 SVBPQ8N300 66 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 PPP1R1CQ8WVI7 109 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 CHCHD1Q96BP2 118 aaKnown RBP2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 LINC00467Q9BRT7 94 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 UPK3BQ9BT76 320 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 NAA60Q9H7X0 242 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 LY96Q9Y6Y9 160 aa2.19□□□□□ -2.06
HMGB1P25-201ENST00000468402 NOTCH3Q9UM47 2321 aa2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 PRRC2AP48634 2157 aaKnown RBP2.18□□□□□ -2.06
HMGB1P25-201ENST00000468402 C3orf85A0A1B0GTC6 90 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms