RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 IGKV3D-20A0A0C4DH25 116 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 P01737 135 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 OR10G8Q8NGN5 311 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
SCAF4-204ENST00000467731 CRYGDP07320 174 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 FAM231DQ6ZW35 169 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 SBSPONQ8IVN8 264 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 IGHV1OR15-1A0A075B7D0 117 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 TMSB15BA0A087X1C1 80 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 LINC01559Q495D7 138 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 ZNF575Q86XF7 245 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 OSTCQ9NRP0 149 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 MUC4Q99102 2169 aa4.97□□□□□ -1.61
SCAF4-204ENST00000467731 E9PLD3 99 aa4.96□□□□□ -1.61
SCAF4-204ENST00000467731 H3BMG7 143 aa4.96□□□□□ -1.61
SCAF4-204ENST00000467731 GNRH2O43555 120 aa4.96□□□□□ -1.62
SCAF4-204ENST00000467731 SNCGO76070 127 aa4.96□□□□□ -1.62
SCAF4-204ENST00000467731 HLA-DQA1P01909 254 aa4.96□□□□□ -1.62
SCAF4-204ENST00000467731 RPP21Q9H633 154 aaKnown RBP4.96□□□□□ -1.62
SCAF4-204ENST00000467731 RETNQ9HD89 108 aa4.96□□□□□ -1.62
SCAF4-204ENST00000467731 V9GYV3 84 aa4.96□□□□□ -1.62
SCAF4-204ENST00000467731 FBN3Q75N90 2809 aa4.96□□□□□ -1.62
SCAF4-204ENST00000467731 IGLC6P0CF74 106 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 MALP21145 153 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 ZNF415Q09FC8 603 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 PPDPFLQ8WWR9 84 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 EDA2RQ9HAV5 297 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 X6R8D5 127 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 SPRY2O43597 315 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 STAB2Q8WWQ8 2551 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 APCSP02743 223 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 BAALCQ8WXS3 180 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 OVOL2Q9BRP0 275 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 LINC00467Q9BRT7 94 aa4.95□□□□□ -1.62
SCAF4-204ENST00000467731 FGF6P10767 208 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
SCAF4-204ENST00000467731 RRN3P1Q2M238 152 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 CT83Q5H943 113 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 TMEM263Q8WUH6 116 aaKnown RBP4.94□□□□□ -1.62
SCAF4-204ENST00000467731 TM2D3Q9BRN9 247 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 TP53TG1Q9Y2A0 90 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 TRGV11A0A075B6L2 103 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 IGHV3-16A0A0C4DH30 117 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 A8MWL6 223 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 H3BVH4 76 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 S100A4P26447 101 aaKnown RBP4.94□□□□□ -1.62
SCAF4-204ENST00000467731 ASIPP42127 132 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 B9D2Q9BPU9 175 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 TGP01266 2768 aa4.94□□□□□ -1.62
SCAF4-204ENST00000467731 HIGD1CA8MV81 97 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 C6orf226Q5I0X4 101 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
SCAF4-204ENST00000467731 A0A0U1RRA0 63 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 PLAC8L1A1L4L8 177 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 DEFB4AO15263 64 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 HERVK_113P63121 156 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 Q8NAQ8 132 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 PHLDA1Q8WV24 401 aaPredicted RBP4.93□□□□□ -1.62
SCAF4-204ENST00000467731 C16orf74Q96GX8 76 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 C18orf15Q96N68 181 aa4.93□□□□□ -1.62
SCAF4-204ENST00000467731 NACAE9PAV3 2078 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 SMIM27A0A1W2PRY6 76 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 IGLL5B9A064 214 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 OR5AL1P0C617 328 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 MIFP14174 115 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 GCSHP23434 173 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 HRCT1Q6UXD1 115 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 GFRA4Q9GZZ7 299 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 TRAV4A0A0B4J268 109 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 ATP5LO75964 103 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 LYZL1Q6UWQ5 148 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 ZNF493Q6ZR52 646 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 NUP35Q8NFH5 326 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 C9orf85Q96MD7 179 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 ZMAT4Q9H898 229 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 ZNF561-AS1K7EIQ3 104 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 CAMPP49913 170 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 FOXA3P55318 350 aaPredicted RBP4.92□□□□□ -1.62
SCAF4-204ENST00000467731 TIRAPP58753 221 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 IL17DQ8TAD2 202 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 PGLYRP4Q96LB8 373 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 NOP10Q9NPE3 64 aaKnown RBP4.92□□□□□ -1.62
SCAF4-204ENST00000467731 PHLDA3Q9Y5J5 127 aa4.92□□□□□ -1.62
SCAF4-204ENST00000467731 NMUP48645 174 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 PMVKQ15126 192 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 LINC01545Q5VT33 79 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 CFAP126Q5VTH2 177 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 GATD1Q8NB37 220 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 DNAH7Q8WXX0 4024 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 SPINK4O60575 86 aa4.91□□□□□ -1.62
SCAF4-204ENST00000467731 MED14OSP0DP75 135 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms