RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PLGLAQ15195 96 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 DEFB121Q5J5C9 76 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 STRCQ7RTU9 1775 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 HEATR5AQ86XA9 2040 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 KNDC1Q76NI1 1749 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 KIAA1549LQ6ZVL6 1849 aa1.94□□□□□ -2.1
VPS50-209ENST00000467326 LRRC7Q96NW7 1537 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 RNF17Q9BXT8 1623 aaKnown RBP1.93□□□□□ -2.1
VPS50-209ENST00000467326 IGLV3-32A0A0A0MS00 114 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 MYMXA0A1B0GTQ4 84 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 TRBV6-4A0A1B0GX49 114 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 HIGD1CA8MV81 97 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 H3BRN7 92 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 TFF1P04155 84 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 GCHFRP30047 84 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 UBE2D3P61077 147 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 UBE2D2P62837 147 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 TOMM5Q8N4H5 51 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 Q8N6K4 173 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 C1orf167Q5SNV9 1468 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 PRXQ9BXM0 1461 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 LAMB4A4D0S4 1761 aa1.93□□□□□ -2.1
VPS50-209ENST00000467326 MYO16Q9Y6X6 1858 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 DISP1Q96F81 1524 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 LAMC1P11047 1609 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 SCN3AQ9NY46 2000 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 TRGV4A0A0C4DH28 118 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 TEX49A0A1B0GTD5 131 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 TMEM14DPA8MWL7 114 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 JMJD7-PLA2G4BH0Y9G9 81 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 CHKB-CPT1BH3BT56 60 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 PPYP01298 95 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 IGHV3-30P01768 117 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 IGHV3-30-5P0DP03 117 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
VPS50-209ENST00000467326 UBE2D1P51668 147 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 EFNA4P52798 201 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 ELOF1P60002 83 aaKnown RBP1.92□□□□□ -2.1
VPS50-209ENST00000467326 C10orf55Q5SWW7 151 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 PPP1R1CQ8WVI7 109 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 DIP2CQ9Y2E4 1556 aa1.92□□□□□ -2.1
VPS50-209ENST00000467326 IQGAP3Q86VI3 1631 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 MADDQ8WXG6 1647 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 MON2Q7Z3U7 1717 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 TCHHQ07283 1943 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 MYH4Q9Y623 1939 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 CHD3Q12873 2000 aaKnown RBP1.91□□□□□ -2.1
VPS50-209ENST00000467326 LAMB2P55268 1798 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 CROCC2H7BZ55 1655 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 H3BVH4 76 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 DNAL4O96015 105 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 SAA2P0DJI9 122 aaPredicted RBP1.91□□□□□ -2.1
VPS50-209ENST00000467326 ATXN8Q156A1 80 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 TPRXLQ17RH7 258 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 C20orf197Q8N268 126 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 TRPM6Q9BX84 2022 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 ZSWIM8A7E2V4 1837 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 MYO5CQ9NQX4 1742 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 TARBP1Q13395 1621 aaKnown RBP1.91□□□□□ -2.1
VPS50-209ENST00000467326 ABCA6Q8N139 1617 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 MYO9BQ13459 2157 aa1.91□□□□□ -2.1
VPS50-209ENST00000467326 ANK1P16157 1881 aa1.9□□□□□ -2.1
VPS50-209ENST00000467326 LAMB1P07942 1786 aa1.9□□□□□ -2.1
VPS50-209ENST00000467326 RGPD4Q7Z3J3 1758 aa1.9□□□□□ -2.1
VPS50-209ENST00000467326 COL11A1P12107 1806 aaPredicted RBP1.9□□□□□ -2.11
VPS50-209ENST00000467326 PARP14Q460N5 1801 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 TRAV22A0A0B4J277 110 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 A0A1W2PNN7 141 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 SDHAF1A6NFY7 115 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 IQCF6A8MYZ5 107 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 LEPROTL1O95214 131 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 PDE6GP18545 87 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 SSBP1Q04837 148 aaKnown RBP1.9□□□□□ -2.11
VPS50-209ENST00000467326 Q6JHZ5 121 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 DEFB107AQ8IZN7 70 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 FAM103A1Q9BTL3 118 aaKnown RBP1.9□□□□□ -2.11
VPS50-209ENST00000467326 TMEM14CQ9P0S9 112 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 PRR14LQ5THK1 2151 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 CLTCQ00610 1675 aaKnown RBP1.9□□□□□ -2.11
VPS50-209ENST00000467326 CTTNBP2Q8WZ74 1663 aa1.9□□□□□ -2.11
VPS50-209ENST00000467326 DIP2AQ14689 1571 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 UGGT1Q9NYU2 1555 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 NWD2Q9ULI1 1742 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 PIK3C2BO00750 1634 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 SHROOM2Q13796 1616 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 MYO3AQ8NEV4 1616 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 IGKV3-7A0A075B6H7 116 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 TRBV6-7A0A0A0MS04 114 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 PRH1P02810 166 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 FAM74A4Q5TZK3 123 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 FAM223AQ8IWN6 122 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 AMELXQ99217 191 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 TXNDC17Q9BRA2 123 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 LENEPQ9Y5L5 61 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 HMGXB3Q12766 1538 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 ASXL1Q8IXJ9 1541 aa1.89□□□□□ -2.11
VPS50-209ENST00000467326 PPRC1Q5VV67 1664 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms