RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ZNF292O60281 2723 aa11.35□□□□□ -0.59
CHD1L-205ENST00000467213 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
CHD1L-205ENST00000467213 COX7A2LO14548 114 aa11.35□□□□□ -0.59
CHD1L-205ENST00000467213 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
CHD1L-205ENST00000467213 TRACP01848 142 aa11.34□□□□□ -0.59
CHD1L-205ENST00000467213 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
CHD1L-205ENST00000467213 LRBAP50851 2863 aa11.34□□□□□ -0.59
CHD1L-205ENST00000467213 CLEC2BQ92478 149 aa11.34□□□□□ -0.59
CHD1L-205ENST00000467213 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
CHD1L-205ENST00000467213 CACNA1BQ00975 2339 aa11.34□□□□□ -0.59
CHD1L-205ENST00000467213 BLCAPP62952 87 aa11.33□□□□□ -0.59
CHD1L-205ENST00000467213 SPINK13Q1W4C9 94 aa11.33□□□□□ -0.59
CHD1L-205ENST00000467213 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.59
CHD1L-205ENST00000467213 BRD3OSQ6XYD6 125 aa11.33□□□□□ -0.59
CHD1L-205ENST00000467213 LINC00643Q86TS7 51 aa11.33□□□□□ -0.59
CHD1L-205ENST00000467213 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
CHD1L-205ENST00000467213 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
CHD1L-205ENST00000467213 CXCL5P42830 114 aa11.33□□□□□ -0.6
CHD1L-205ENST00000467213 MEIG1Q5JSS6 88 aa11.33□□□□□ -0.6
CHD1L-205ENST00000467213 EDN2P20800 178 aa11.32□□□□□ -0.6
CHD1L-205ENST00000467213 PIMREGQ9BSJ6 248 aa11.32□□□□□ -0.6
CHD1L-205ENST00000467213 LY6EQ16553 131 aa11.32□□□□□ -0.6
CHD1L-205ENST00000467213 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
CHD1L-205ENST00000467213 LINC00308Q8TCZ7 52 aa11.31□□□□□ -0.6
CHD1L-205ENST00000467213 ASH1LQ9NR48 2969 aaKnown RBP11.31□□□□□ -0.6
CHD1L-205ENST00000467213 IGHV3-53P01767 116 aa11.31□□□□□ -0.6
CHD1L-205ENST00000467213 IGHV4-38-2P0DP08 117 aa11.31□□□□□ -0.6
CHD1L-205ENST00000467213 DAND5Q8N907 189 aa11.31□□□□□ -0.6
CHD1L-205ENST00000467213 HERVK_113P63121 156 aa11.3□□□□□ -0.6
CHD1L-205ENST00000467213 BEAN1Q3B7T3 259 aa11.3□□□□□ -0.6
CHD1L-205ENST00000467213 LINC01587Q99440 93 aa11.3□□□□□ -0.6
CHD1L-205ENST00000467213 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
CHD1L-205ENST00000467213 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
CHD1L-205ENST00000467213 PEMTQ9UBM1 199 aa11.3□□□□□ -0.6
CHD1L-205ENST00000467213 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
CHD1L-205ENST00000467213 PF4P02776 101 aa11.29□□□□□ -0.6
CHD1L-205ENST00000467213 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
CHD1L-205ENST00000467213 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
CHD1L-205ENST00000467213 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
CHD1L-205ENST00000467213 HERV-K104P63124 156 aa11.28□□□□□ -0.6
CHD1L-205ENST00000467213 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
CHD1L-205ENST00000467213 CEMP1Q6PRD7 247 aaPredicted RBP11.28□□□□□ -0.6
CHD1L-205ENST00000467213 CDKN2A-AS1Q9UH64 79 aa11.28□□□□□ -0.6
CHD1L-205ENST00000467213 NACAE9PAV3 2078 aa11.27□□□□□ -0.6
CHD1L-205ENST00000467213 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.61
CHD1L-205ENST00000467213 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
CHD1L-205ENST00000467213 Q6ZSV7 163 aa11.27□□□□□ -0.61
CHD1L-205ENST00000467213 C5orf38Q86SI9 138 aa11.27□□□□□ -0.61
CHD1L-205ENST00000467213 ZFHX2Q9C0A1 2572 aaPredicted RBP11.27□□□□□ -0.61
CHD1L-205ENST00000467213 ABCA2Q9BZC7 2435 aa11.26□□□□□ -0.61
CHD1L-205ENST00000467213 INAFM2P0DMQ5 153 aa11.26□□□□□ -0.61
CHD1L-205ENST00000467213 SMIM20Q8N5G0 67 aa11.26□□□□□ -0.61
CHD1L-205ENST00000467213 RS1O15537 224 aa11.26□□□□□ -0.61
CHD1L-205ENST00000467213 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
CHD1L-205ENST00000467213 TLN1Q9Y490 2541 aaKnown RBP11.25□□□□□ -0.61
CHD1L-205ENST00000467213 UQCRQO14949 82 aa11.25□□□□□ -0.61
CHD1L-205ENST00000467213 OVOL2Q9BRP0 275 aa11.25□□□□□ -0.61
CHD1L-205ENST00000467213 CHCHD5Q9BSY4 110 aa11.25□□□□□ -0.61
CHD1L-205ENST00000467213 C3orf22Q8N5N4 141 aa11.24□□□□□ -0.61
CHD1L-205ENST00000467213 A8MZ25 164 aa11.24□□□□□ -0.61
CHD1L-205ENST00000467213 MSMBP08118 114 aa11.24□□□□□ -0.61
CHD1L-205ENST00000467213 PROK1P58294 105 aa11.24□□□□□ -0.61
CHD1L-205ENST00000467213 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
CHD1L-205ENST00000467213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
CHD1L-205ENST00000467213 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
CHD1L-205ENST00000467213 Q6ZSN1 163 aa11.23□□□□□ -0.61
CHD1L-205ENST00000467213 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
CHD1L-205ENST00000467213 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
CHD1L-205ENST00000467213 PTPRQQ9UMZ3 2332 aa11.23□□□□□ -0.61
CHD1L-205ENST00000467213 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 Q9H8V8 135 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 MED13LQ71F56 2210 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
CHD1L-205ENST00000467213 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 NPC2P61916 151 aa11.22□□□□□ -0.61
CHD1L-205ENST00000467213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-205ENST00000467213 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
CHD1L-205ENST00000467213 HIST1H4AP62805 103 aaKnown RBP11.21□□□□□ -0.61
CHD1L-205ENST00000467213 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
CHD1L-205ENST00000467213 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
CHD1L-205ENST00000467213 SMCR5Q8TEV8 140 aa11.21□□□□□ -0.61
CHD1L-205ENST00000467213 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
CHD1L-205ENST00000467213 C22orf24Q9Y442 160 aa11.21□□□□□ -0.62
CHD1L-205ENST00000467213 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 IGHV3-73A0A0B4J1V6 119 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 SYNJ2BPP57105 145 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 HIST2H2BCQ6DN03 193 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 TRAV13-2A0A0B4J235 113 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
CHD1L-205ENST00000467213 TRBV10-1A0A0K0K1A3 114 aa11.19□□□□□ -0.62
CHD1L-205ENST00000467213 COX6A2Q02221 97 aa11.19□□□□□ -0.62
CHD1L-205ENST00000467213 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
CHD1L-205ENST00000467213 NDUFA7O95182 113 aa11.18□□□□□ -0.62
CHD1L-205ENST00000467213 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms