RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 PRM2P04554 102 aa13.24□□□□□ -0.29
LETM1-202ENST00000466175 RNASE8Q8TDE3 154 aaKnown RBP13.24□□□□□ -0.29
LETM1-202ENST00000466175 PF4P02776 101 aa13.23□□□□□ -0.29
LETM1-202ENST00000466175 AZU1P20160 251 aa13.23□□□□□ -0.29
LETM1-202ENST00000466175 C19orf73Q9NVV2 129 aa13.23□□□□□ -0.29
LETM1-202ENST00000466175 MYMXA0A1B0GTQ4 84 aa13.22□□□□□ -0.29
LETM1-202ENST00000466175 C11orf86A6NJI1 115 aa13.22□□□□□ -0.29
LETM1-202ENST00000466175 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 CIDEAO60543 219 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 NFE4Q86UQ8 179 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 MAPKAPK5-AS1Q8N8E1 139 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 OR4C5Q8NGB2 326 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 C16orf74Q96GX8 76 aa13.21□□□□□ -0.29
LETM1-202ENST00000466175 DAZ2Q13117 558 aaKnown RBP13.21□□□□□ -0.3
LETM1-202ENST00000466175 LINC00482Q8N8I6 264 aa13.21□□□□□ -0.3
LETM1-202ENST00000466175 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.3
LETM1-202ENST00000466175 TM2D2Q9BX73 214 aa13.21□□□□□ -0.3
LETM1-202ENST00000466175 TTTY13Q9BZ97 58 aa13.21□□□□□ -0.3
LETM1-202ENST00000466175 DNHD1Q96M86 4753 aa13.2□□□□□ -0.3
LETM1-202ENST00000466175 INSL3P51460 131 aa13.2□□□□□ -0.3
LETM1-202ENST00000466175 VCX2Q9H322 139 aa13.2□□□□□ -0.3
LETM1-202ENST00000466175 SPANXA1Q9NS26 97 aa13.2□□□□□ -0.3
LETM1-202ENST00000466175 TRGV1A0A0A0MS02 117 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 TRAV4A0A0B4J268 109 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 KRTAP10-3P60369 221 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 VAMP3Q15836 100 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 Q6ZSN1 163 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 CEND1Q8N111 149 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 NACAE9PAV3 2078 aa13.19□□□□□ -0.3
LETM1-202ENST00000466175 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
LETM1-202ENST00000466175 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
LETM1-202ENST00000466175 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
LETM1-202ENST00000466175 DEFB104AQ8WTQ1 72 aa13.18□□□□□ -0.3
LETM1-202ENST00000466175 GCSHP23434 173 aa13.17□□□□□ -0.3
LETM1-202ENST00000466175 COTL1Q14019 142 aa13.17□□□□□ -0.3
LETM1-202ENST00000466175 Q6ZVH6 145 aa13.17□□□□□ -0.3
LETM1-202ENST00000466175 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
LETM1-202ENST00000466175 SMIM13P0DJ93 91 aa13.17□□□□□ -0.3
LETM1-202ENST00000466175 TMEM170BQ5T4T1 132 aa13.16□□□□□ -0.3
LETM1-202ENST00000466175 AMELXQ99217 191 aa13.16□□□□□ -0.3
LETM1-202ENST00000466175 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
LETM1-202ENST00000466175 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.3
LETM1-202ENST00000466175 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
LETM1-202ENST00000466175 OVOL2Q9BRP0 275 aa13.15□□□□□ -0.3
LETM1-202ENST00000466175 CHCHD7Q9BUK0 85 aa13.15□□□□□ -0.3
LETM1-202ENST00000466175 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
LETM1-202ENST00000466175 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
LETM1-202ENST00000466175 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 K7EQD1 137 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 RPL36AP83881 106 aaKnown RBP13.13□□□□□ -0.31
LETM1-202ENST00000466175 RRN3P1Q2M238 152 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 C9orf66Q5T8R8 295 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 RPL36ALQ969Q0 106 aaKnown RBP13.13□□□□□ -0.31
LETM1-202ENST00000466175 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 WNK1Q9H4A3 2382 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 CCL25O15444 150 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 Q6ZTI0 123 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
LETM1-202ENST00000466175 WFDC10AQ9H1F0 79 aa13.13□□□□□ -0.31
LETM1-202ENST00000466175 FXYD2P54710 66 aa13.12□□□□□ -0.31
LETM1-202ENST00000466175 EMP1P54849 157 aa13.12□□□□□ -0.31
LETM1-202ENST00000466175 DAZ4Q86SG3 579 aaKnown RBP13.12□□□□□ -0.31
LETM1-202ENST00000466175 NOP10Q9NPE3 64 aaKnown RBP13.12□□□□□ -0.31
LETM1-202ENST00000466175 DAZ3Q9NR90 486 aaKnown RBP13.12□□□□□ -0.31
LETM1-202ENST00000466175 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
LETM1-202ENST00000466175 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
LETM1-202ENST00000466175 LEPROTO15243 131 aa13.11□□□□□ -0.31
LETM1-202ENST00000466175 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
LETM1-202ENST00000466175 AMMECR1LQ6DCA0 310 aa13.11□□□□□ -0.31
LETM1-202ENST00000466175 SCGB1D4Q6XE38 83 aa13.11□□□□□ -0.31
LETM1-202ENST00000466175 ZNF479Q96JC4 524 aa13.11□□□□□ -0.31
LETM1-202ENST00000466175 CITED1Q99966 193 aa13.11□□□□□ -0.31
LETM1-202ENST00000466175 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
LETM1-202ENST00000466175 PLAC8L1A1L4L8 177 aa13.1□□□□□ -0.31
LETM1-202ENST00000466175 ZNF22P17026 224 aaPredicted RBP13.1□□□□□ -0.31
LETM1-202ENST00000466175 LGALS3P17931 250 aaKnown RBP13.1□□□□□ -0.31
LETM1-202ENST00000466175 GTF2H5Q6ZYL4 71 aa13.1□□□□□ -0.31
LETM1-202ENST00000466175 Q9UF83 564 aa13.1□□□□□ -0.31
LETM1-202ENST00000466175 J3QQQ9 107 aa13.09□□□□□ -0.31
LETM1-202ENST00000466175 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
LETM1-202ENST00000466175 VWFP04275 2813 aa13.08□□□□□ -0.31
LETM1-202ENST00000466175 PKD1L1Q8TDX9 2849 aa13.08□□□□□ -0.32
LETM1-202ENST00000466175 TMEM238LA0A1B0GVL6 79 aa13.08□□□□□ -0.32
LETM1-202ENST00000466175 TINCRA0A1B0GVN0 87 aa13.08□□□□□ -0.32
LETM1-202ENST00000466175 A6NJY4 79 aa13.08□□□□□ -0.32
LETM1-202ENST00000466175 TRGV2A0A075B6R0 118 aa13.07□□□□□ -0.32
LETM1-202ENST00000466175 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
LETM1-202ENST00000466175 TRBV6-4A0A1B0GX49 114 aa13.07□□□□□ -0.32
LETM1-202ENST00000466175 H3BUT2 72 aa13.07□□□□□ -0.32
LETM1-202ENST00000466175 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
LETM1-202ENST00000466175 SPANXB1Q9NS25 103 aaPredicted RBP13.07□□□□□ -0.32
LETM1-202ENST00000466175 NHP2Q9NX24 153 aaKnown RBP13.07□□□□□ -0.32
LETM1-202ENST00000466175 ANK2Q01484 3957 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 IGHV3-38A0A0C4DH36 116 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 UBE2D3P61077 147 aa13.06□□□□□ -0.32
LETM1-202ENST00000466175 UBE2D2P62837 147 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms