RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GNG2P59768 71 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 S100A7L2Q5SY68 101 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 RPL7L1Q6DKI1 246 aaKnown RBP0.7□□□□□ -2.3
CLK1-208ENST00000464454 SPATA8Q6RVD6 105 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 CYP2G1PQ6ZSU1 146 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 Q96NJ1 140 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 LENEPQ9Y5L5 61 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 PPIP5K1Q6PFW1 1433 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 LINC00032P0C843 101 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 UBE2D3P61077 147 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 UBE2D2P62837 147 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 SPTSSBQ8NFR3 76 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 CDC42SE2Q9NRR3 84 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 TMEM14BQ9NUH8 114 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 NSD3Q9BZ95 1437 aa0.69□□□□□ -2.3
CLK1-208ENST00000464454 RBBP6Q7Z6E9 1792 aaKnown RBP0.68□□□□□ -2.3
CLK1-208ENST00000464454 IGLC1P0CG04 106 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 CCL18P55774 89 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 EDDM3BP56851 147 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 S100A10P60903 97 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 RPL37P61927 97 aaKnown RBP0.68□□□□□ -2.3
CLK1-208ENST00000464454 MYOZ3Q8TDC0 251 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 TSLPQ969D9 159 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 AMELXQ99217 191 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 MGST2Q99735 147 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 NDUFA4L2Q9NRX3 87 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 PLXNA1Q9UIW2 1896 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 COL4A6Q14031 1691 aa0.68□□□□□ -2.3
CLK1-208ENST00000464454 MED14O60244 1454 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 NRXN2Q9P2S2 1712 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 TRAV22A0A0B4J277 110 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 TRBV7-7A0A0K0K1E9 115 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 hADV29S1A0JD25 119 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 C10orf142B7Z368 130 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 SPINT3P49223 89 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 FXYD6P3P58550 94 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 SPINK13Q1W4C9 94 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 FAM74A4Q5TZK3 123 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 PLAC4Q8WY50 150 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 RREB1Q92766 1687 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 FYCO1Q9BQS8 1478 aa0.67□□□□□ -2.3
CLK1-208ENST00000464454 TNS1Q9HBL0 1735 aaKnown RBP0.67□□□□□ -2.3
CLK1-208ENST00000464454 KNTC1P50748 2209 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 ASH1LQ9NR48 2969 aaKnown RBP0.66□□□□□ -2.3
CLK1-208ENST00000464454 DIP2CQ9Y2E4 1556 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 PHIPQ8WWQ0 1821 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 NAP1L6A6NFF2 107 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 H7BZZ5 65 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 UBA52P62987 128 aaKnown RBP0.66□□□□□ -2.3
CLK1-208ENST00000464454 C10orf128Q5T292 105 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 C9orf62Q8N4C0 152 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 V9GYV3 84 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 ANKRD36BQ8N2N9 1353 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 RAPGEF2Q9Y4G8 1499 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 PATJQ8NI35 1801 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 RB1CC1Q8TDY2 1594 aa0.66□□□□□ -2.3
CLK1-208ENST00000464454 HMGXB3Q12766 1538 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 ZMYM4Q5VZL5 1548 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 ARAP2Q8WZ64 1704 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 A0A0D9SG42 100 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 LOC285095A0A1B0GVY8 99 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 TMEM14DPA8MWL7 114 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 NDUFC1O43677 76 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 ASIPP42127 132 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 ZNF137PP52743 207 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 KRTDAPP60985 99 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 SPRR4Q96PI1 79 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 BPESC1Q9GZL8 116 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 LINC00472Q9H8W2 130 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 DYNLRB1Q9NP97 96 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 AP4S1Q9Y587 144 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 LINC01558Q9Y6Z2 57 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 V9GYS6 101 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 MYOM1P52179 1685 aa0.65□□□□□ -2.31
CLK1-208ENST00000464454 ESPL1Q14674 2120 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 GVQW2A0A096LPI5 108 aaPredicted RBP0.64□□□□□ -2.31
CLK1-208ENST00000464454 HMGN4O00479 90 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 SFT2D2O95562 160 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 SNCAP37840 140 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 VMO1Q7Z5L0 202 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 SERP2Q8N6R1 65 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 FAM213BQ8TBF2 198 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 LINC01600Q96MT4 127 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 TRGV9Q99603 122 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 NPVFQ9HCQ7 196 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 PRO1854Q9UHT4 67 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 SCP2D1Q9UJQ7 156 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 MRC1P22897 1456 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 GOLGA3Q08378 1498 aa0.64□□□□□ -2.31
CLK1-208ENST00000464454 CDK13Q14004 1512 aaKnown RBP0.64□□□□□ -2.31
CLK1-208ENST00000464454 DOCK1Q14185 1865 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 SIPA1L3O60292 1781 aaPredicted RBP0.63□□□□□ -2.31
CLK1-208ENST00000464454 IQSEC2Q5JU85 1478 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 ATOX1O00244 68 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 GNGT2O14610 69 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 BCE1O60756 84 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 GNG11P61952 73 aa0.63□□□□□ -2.31
CLK1-208ENST00000464454 SPAG11BQ08648 103 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms