RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 ACANP16112 2415 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 SPTBN2O15020 2390 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 FAM92AA1XBS5 289 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 NDUFB6O95139 128 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 TSTD1Q8NFU3 115 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 COPZ2Q9P299 210 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 PRO0255Q9UI72 69 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 USP9YO00507 2555 aaPredicted RBP-0.27□□□□□ -2.45
USP9X-204ENST00000463829 CSMD3Q7Z407 3707 aa-0.27□□□□□ -2.45
USP9X-204ENST00000463829 BIRC6Q9NR09 4857 aa-0.28□□□□□ -2.45
USP9X-204ENST00000463829 GUCA1AP43080 201 aaPredicted RBP-0.28□□□□□ -2.45
USP9X-204ENST00000463829 MT4P47944 62 aa-0.28□□□□□ -2.45
USP9X-204ENST00000463829 BAGE3Q86Y29 109 aa-0.28□□□□□ -2.45
USP9X-204ENST00000463829 FAT2Q9NYQ8 4349 aa-0.28□□□□□ -2.45
USP9X-204ENST00000463829 CACNA1AO00555 2505 aa-0.28□□□□□ -2.45
USP9X-204ENST00000463829 CCL8P80075 99 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 SMIM21Q3B7S5 101 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 S100A7L2Q5SY68 101 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 KCNRGQ8N5I3 272 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 TPT1P8Q9HAU6 139 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 LINC00312Q9Y6C7 94 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 FLNCQ14315 2725 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 LRRC37A3O60309 1634 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 BIVM-ERCC5R4GMW8 1640 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 MYO18BQ8IUG5 2567 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 LPAP08519 4548 aa-0.29□□□□□ -2.46
USP9X-204ENST00000463829 MYH9P35579 1960 aaKnown RBP-0.3□□□□□ -2.46
USP9X-204ENST00000463829 EPG5Q9HCE0 2579 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 M0R3E3 92 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 COPZ1P61923 177 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 KRTAP19-7Q3SYF9 63 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 CFAP126Q5VTH2 177 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 MAFIPQ8WZ33 124 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 ANP32BQ92688 251 aaKnown RBP-0.3□□□□□ -2.46
USP9X-204ENST00000463829 TCEAL4Q96EI5 215 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 USP9XQ93008 2570 aaPredicted RBP-0.3□□□□□ -2.46
USP9X-204ENST00000463829 DOPEY2Q9Y3R5 2298 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 CEP152O94986 1710 aa-0.3□□□□□ -2.46
USP9X-204ENST00000463829 NHSL1Q5SYE7 1610 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 TGP01266 2768 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 SETXQ7Z333 2677 aaKnown RBP-0.31□□□□□ -2.46
USP9X-204ENST00000463829 RPS25P62851 125 aaKnown RBP-0.31□□□□□ -2.46
USP9X-204ENST00000463829 WFDC2Q14508 124 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 ALX1Q15699 326 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 TMEM191AQ9H0A3 160 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 IFT172Q9UG01 1749 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 NF1P21359 2839 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 NIPBLQ6KC79 2804 aaeCLIP-0.31□□□□□ -2.46
USP9X-204ENST00000463829 ZNF292O60281 2723 aa-0.31□□□□□ -2.46
USP9X-204ENST00000463829 COL12A1Q99715 3063 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 FAM208BQ5VWN6 2430 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 FLNAP21333 2647 aaKnown RBP-0.32□□□□□ -2.46
USP9X-204ENST00000463829 FASNP49327 2511 aaKnown RBP-0.32□□□□□ -2.46
USP9X-204ENST00000463829 CELSR3Q9NYQ7 3312 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 SEC11CQ9BY50 192 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 NPVFQ9HCQ7 196 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.32□□□□□ -2.46
USP9X-204ENST00000463829 ZNF609O15014 1411 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 CASKIN1Q8WXD9 1431 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 AKAP6Q13023 2319 aa-0.32□□□□□ -2.46
USP9X-204ENST00000463829 LAMA2P24043 3122 aaKnown RBP-0.33□□□□□ -2.46
USP9X-204ENST00000463829 NBPF19A0A087WUL8 3843 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 ZNF518AQ6AHZ1 1483 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 IFT140Q96RY7 1462 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 TRAV22A0A0B4J277 110 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 CCL18P55774 89 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 SMCO1Q147U7 214 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 SDF2Q99470 211 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 SCN3BQ9NY72 215 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 PTPRQQ9UMZ3 2332 aa-0.33□□□□□ -2.46
USP9X-204ENST00000463829 WDR87Q6ZQQ6 2873 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 PXDNQ92626 1479 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 MGAM2Q2M2H8 2515 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 PTPN13Q12923 2485 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 DEFB109BQ30KR1 87 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 CCDC167Q9P0B6 97 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 SPCS1Q9Y6A9 102 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 R4GMQ9 66 aa-0.34□□□□□ -2.46
USP9X-204ENST00000463829 HSPG2P98160 4391 aa-0.35□□□□□ -2.46
USP9X-204ENST00000463829 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 LOC105371267A0A1B0GV96 52 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 SIX6O95475 246 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 PPP1R17O96001 155 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 Q5VSD8 79 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 PFDN5Q99471 154 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 LYSTQ99698 3801 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 ANKRD11Q6UB99 2663 aaPredicted RBP-0.35□□□□□ -2.47
USP9X-204ENST00000463829 LRP1BQ9NZR2 4599 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 C2CD3Q4AC94 2353 aa-0.35□□□□□ -2.47
USP9X-204ENST00000463829 FLNBO75369 2602 aaKnown RBP-0.36□□□□□ -2.47
USP9X-204ENST00000463829 PIGBOS1A0A0B4J2F0 54 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 HCG22E2RYF7 251 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 DPH3Q96FX2 82 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 MYO15AQ9UKN7 3530 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 NWD2Q9ULI1 1742 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 UNC13AQ9UPW8 1703 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 ITPR2Q14571 2701 aa-0.36□□□□□ -2.47
USP9X-204ENST00000463829 MAP1BP46821 2468 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms