RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CBLN2Q8IUK8 224 aa5.91□□□□□ -1.46
LDB1-203ENST00000461873 C15orf54Q8N8G6 183 aa5.91□□□□□ -1.46
LDB1-203ENST00000461873 DNAJC30Q96LL9 226 aa5.91□□□□□ -1.46
LDB1-203ENST00000461873 C19orf71A6NCJ1 209 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 MT-ND4LP03901 98 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 PLA2G1BP04054 148 aaKnown RBP5.9□□□□□ -1.46
LDB1-203ENST00000461873 XGP55808 180 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 BORCS7Q96B45 105 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 SSBP4Q9BWG4 385 aaPredicted RBP5.9□□□□□ -1.46
LDB1-203ENST00000461873 OSTCQ9NRP0 149 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 Q9UF83 564 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 V9GYV3 84 aa5.9□□□□□ -1.46
LDB1-203ENST00000461873 IGHV1-24A0A0C4DH33 117 aa5.89□□□□□ -1.47
LDB1-203ENST00000461873 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
LDB1-203ENST00000461873 RHEBQ15382 184 aa5.89□□□□□ -1.47
LDB1-203ENST00000461873 TWIST1Q15672 202 aa5.89□□□□□ -1.47
LDB1-203ENST00000461873 MIAQ16674 131 aa5.89□□□□□ -1.47
LDB1-203ENST00000461873 Q8N3U1 123 aa5.89□□□□□ -1.47
LDB1-203ENST00000461873 HAMPP81172 84 aa5.88□□□□□ -1.47
LDB1-203ENST00000461873 ANAPC16Q96DE5 110 aa5.88□□□□□ -1.47
LDB1-203ENST00000461873 DPH3P1Q9H4G8 78 aa5.88□□□□□ -1.47
LDB1-203ENST00000461873 TGIF2-C20orf24A0A0A6YYL0 155 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 PPP1R2P9O14990 202 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 NTF3P20783 257 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 GAGE6Q13070 117 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 MPV17L2Q567V2 206 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 WDR73Q6P4I2 378 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 RASL11AQ6T310 242 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 FAM231DQ6ZW35 169 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 PGLYRP4Q96LB8 373 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 CTDSP1Q9GZU7 261 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 RPP21Q9H633 154 aaKnown RBP5.87□□□□□ -1.47
LDB1-203ENST00000461873 SMCO4Q9NRQ5 59 aa5.87□□□□□ -1.47
LDB1-203ENST00000461873 COTL1Q14019 142 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 SUMO4Q6EEV6 95 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 LYZL1Q6UWQ5 148 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 TMEM243Q9BU79 118 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 NIT2Q9NQR4 276 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 AP5S1Q9NUS5 200 aa5.86□□□□□ -1.47
LDB1-203ENST00000461873 COLCA2A8K830 154 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 A8MWL6 223 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 IGLC6P0CF74 106 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 AMTP48728 403 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 RBX1P62877 108 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 WFDC2Q14508 124 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 AMMECR1LQ6DCA0 310 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 MRPL54Q6P161 138 aaKnown RBP5.85□□□□□ -1.47
LDB1-203ENST00000461873 CLPSL2Q6UWE3 100 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 GTSF1Q8WW33 167 aa5.85□□□□□ -1.47
LDB1-203ENST00000461873 TRAV8-4A0A0B4J246 113 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 SMIM27A0A1W2PRY6 76 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 M0QY20 66 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 S100PP25815 95 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 REG3AQ06141 175 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 IQCJQ1A5X6 159 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 ENHOQ6UWT2 76 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 NUP35Q8NFH5 326 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 TSKUQ8WUA8 353 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 YPEL4Q96NS1 127 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 TMEM242Q9NWH2 141 aa5.84□□□□□ -1.47
LDB1-203ENST00000461873 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
LDB1-203ENST00000461873 HIGD1CA8MV81 97 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 LINC01620Q4KN68 170 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 DGAT2L7PQ6IED9 249 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 DEFB104AQ8WTQ1 72 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 BTF3L4Q96K17 158 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 KIF25-AS1Q9Y6Z4 181 aa5.83□□□□□ -1.48
LDB1-203ENST00000461873 IGLV10-54A0A075B6I4 117 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 IGKV3OR2-268A0A0C4DH90 116 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 hDV102S1A0JD36 115 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 APCSP02743 223 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 PMCHP20382 165 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 FOXA3P55318 350 aaPredicted RBP5.82□□□□□ -1.48
LDB1-203ENST00000461873 RNASEKQ6P5S7 137 aaKnown RBP5.82□□□□□ -1.48
LDB1-203ENST00000461873 NTM-AS1Q6ZSK4 140 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 TMEM101Q96IK0 257 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 CHAC1Q9BUX1 264 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 FAM30AQ9NZY2 134 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 NAT8BQ9UHF3 227 aa5.82□□□□□ -1.48
LDB1-203ENST00000461873 A0A1B0GUV1 79 aa5.81□□□□□ -1.48
LDB1-203ENST00000461873 CTRLP40313 264 aa5.81□□□□□ -1.48
LDB1-203ENST00000461873 RPS10P46783 165 aaKnown RBP5.81□□□□□ -1.48
LDB1-203ENST00000461873 CAMPP49913 170 aa5.81□□□□□ -1.48
LDB1-203ENST00000461873 CT83Q5H943 113 aa5.81□□□□□ -1.48
LDB1-203ENST00000461873 IMMP2LQ96T52 175 aa5.81□□□□□ -1.48
LDB1-203ENST00000461873 NCR2O95944 276 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 RAB5AP20339 215 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 SMAGPQ0VAQ4 97 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 Q6ZSA8 131 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 GFRA4Q9GZZ7 299 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 PRR34Q9NV39 138 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 FAT1Q14517 4588 aa5.8□□□□□ -1.48
LDB1-203ENST00000461873 TRBV24-1A0A075B6N3 115 aa5.79□□□□□ -1.48
LDB1-203ENST00000461873 TRAV26-2A0A0B4J265 109 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms