RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SUMO4Q6EEV6 95 aa5.96□□□□□ -1.46
BRCA1-207ENST00000461798 RASL11AQ6T310 242 aa5.96□□□□□ -1.46
BRCA1-207ENST00000461798 LYZL1Q6UWQ5 148 aa5.96□□□□□ -1.46
BRCA1-207ENST00000461798 CHAC1Q9BUX1 264 aa5.96□□□□□ -1.46
BRCA1-207ENST00000461798 TPPP3Q9BW30 176 aa5.96□□□□□ -1.46
BRCA1-207ENST00000461798 HERC1Q15751 4861 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 A0A1B0GUV1 79 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 CTRLP40313 264 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 GAGE6Q13070 117 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 LINC01620Q4KN68 170 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 DGAT2L7PQ6IED9 249 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 OCC1Q8TAD7 63 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 PGLYRP4Q96LB8 373 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 DPH3P1Q9H4G8 78 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 NIT2Q9NQR4 276 aa5.95□□□□□ -1.46
BRCA1-207ENST00000461798 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-207ENST00000461798 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 USP17L23D6RBM5 183 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 MGPP08493 103 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 LINC00269Q8N2A0 174 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 LYPD6BQ8NI32 183 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 CIRBP-AS1Q8TBR5 109 aa5.94□□□□□ -1.46
BRCA1-207ENST00000461798 TRAV8-4A0A0B4J246 113 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 TMEM250H0YL14 139 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 K7EN84 100 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 PRSS1P07477 247 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 NKX2-5P52952 324 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-207ENST00000461798 BLOC1S1P78537 153 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 REG3AQ06141 175 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 C9orf163Q8N9P6 203 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 C20orf203Q8NBC4 194 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 TMEM243Q9BU79 118 aa5.93□□□□□ -1.46
BRCA1-207ENST00000461798 RPP21Q9H633 154 aaKnown RBP5.93□□□□□ -1.46
BRCA1-207ENST00000461798 NDUFS6O75380 124 aaKnown RBP5.92□□□□□ -1.46
BRCA1-207ENST00000461798 FOXA3P55318 350 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-207ENST00000461798 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-207ENST00000461798 TWIST1Q15672 202 aa5.92□□□□□ -1.46
BRCA1-207ENST00000461798 FAM231DQ6ZW35 169 aa5.92□□□□□ -1.46
BRCA1-207ENST00000461798 CLRN3Q8NCR9 226 aa5.92□□□□□ -1.46
BRCA1-207ENST00000461798 DEFB104AQ8WTQ1 72 aa5.92□□□□□ -1.46
BRCA1-207ENST00000461798 GTSF1Q8WW33 167 aa5.92□□□□□ -1.46
BRCA1-207ENST00000461798 RNASE7Q9H1E1 156 aaKnown RBP5.92□□□□□ -1.46
BRCA1-207ENST00000461798 IGLV4-60A0A075B6I1 120 aa5.91□□□□□ -1.46
BRCA1-207ENST00000461798 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-207ENST00000461798 HLA-DQA1P01909 254 aa5.91□□□□□ -1.46
BRCA1-207ENST00000461798 SDIM1Q6ZPB5 146 aa5.91□□□□□ -1.46
BRCA1-207ENST00000461798 AKAP14Q86UN6 197 aa5.91□□□□□ -1.46
BRCA1-207ENST00000461798 GATD1Q8NB37 220 aa5.91□□□□□ -1.46
BRCA1-207ENST00000461798 CNBPP62633 177 aaKnown RBP5.9□□□□□ -1.46
BRCA1-207ENST00000461798 COTL1Q14019 142 aa5.9□□□□□ -1.46
BRCA1-207ENST00000461798 CT83Q5H943 113 aa5.9□□□□□ -1.46
BRCA1-207ENST00000461798 CLPSL2Q6UWE3 100 aa5.9□□□□□ -1.46
BRCA1-207ENST00000461798 TEX261Q6UWH6 196 aa5.9□□□□□ -1.46
BRCA1-207ENST00000461798 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
BRCA1-207ENST00000461798 A8MWL6 223 aa5.89□□□□□ -1.47
BRCA1-207ENST00000461798 H7C423 109 aa5.89□□□□□ -1.47
BRCA1-207ENST00000461798 GATCO43716 136 aaKnown RBP5.89□□□□□ -1.47
BRCA1-207ENST00000461798 NCR2O95944 276 aa5.89□□□□□ -1.47
BRCA1-207ENST00000461798 AMTP48728 403 aa5.89□□□□□ -1.47
BRCA1-207ENST00000461798 ALKAL2Q6UX46 152 aa5.89□□□□□ -1.47
BRCA1-207ENST00000461798 SMIM15Q7Z3B0 74 aa5.89□□□□□ -1.47
BRCA1-207ENST00000461798 IGLV10-54A0A075B6I4 117 aa5.88□□□□□ -1.47
BRCA1-207ENST00000461798 TRAV26-2A0A0B4J265 109 aa5.88□□□□□ -1.47
BRCA1-207ENST00000461798 TRBV6-5A0A0K0K1A5 114 aa5.88□□□□□ -1.47
BRCA1-207ENST00000461798 UBE2L6O14933 153 aa5.88□□□□□ -1.47
BRCA1-207ENST00000461798 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
BRCA1-207ENST00000461798 FAM210AQ96ND0 272 aa5.88□□□□□ -1.47
BRCA1-207ENST00000461798 FAM231BA6NCW3 169 aa5.87□□□□□ -1.47
BRCA1-207ENST00000461798 SDHAF1A6NFY7 115 aa5.87□□□□□ -1.47
BRCA1-207ENST00000461798 SLPIP03973 132 aa5.87□□□□□ -1.47
BRCA1-207ENST00000461798 RPL39LQ96EH5 51 aaKnown RBP5.87□□□□□ -1.47
BRCA1-207ENST00000461798 hDV102S1A0JD36 115 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 PANO1I0J062 215 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 I3L3M4 83 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 OXTP01178 125 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 CFAP161Q6P656 301 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 LINC01551Q86U37 167 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 TSKUQ8WUA8 353 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 TMEM191AQ9H0A3 160 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 OSTCQ9NRP0 149 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 AP5S1Q9NUS5 200 aa5.86□□□□□ -1.47
BRCA1-207ENST00000461798 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-207ENST00000461798 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 APCSP02743 223 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 SRP19P09132 144 aaKnown RBP5.85□□□□□ -1.47
BRCA1-207ENST00000461798 FGF6P10767 208 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 ESDP10768 282 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 ZNF25P17030 456 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-207ENST00000461798 POLR2KP53803 58 aaKnown RBP5.85□□□□□ -1.47
BRCA1-207ENST00000461798 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 SMIM7Q9BQ49 75 aa5.85□□□□□ -1.47
BRCA1-207ENST00000461798 EIF5A2Q9GZV4 153 aaKnown RBP5.85□□□□□ -1.47
BRCA1-207ENST00000461798 hCG_2014768A0A024R1R8 64 aa5.84□□□□□ -1.47
BRCA1-207ENST00000461798 IGHV3-64A0A075B6Q5 118 aa5.84□□□□□ -1.47
BRCA1-207ENST00000461798 ZNF727A8MUV8 499 aa5.84□□□□□ -1.47
BRCA1-207ENST00000461798 HIGD1CA8MV81 97 aa5.84□□□□□ -1.47
BRCA1-207ENST00000461798 GAS8-AS1O95177 125 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms