RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 IGLV10-54A0A075B6I4 117 aa5.64□□□□□ -1.51
SOX2-OT-202ENST00000461063 RAB19A4D1S5 217 aa5.64□□□□□ -1.51
SOX2-OT-202ENST00000461063 HNRNPA3P51991 378 aaKnown RBP5.64□□□□□ -1.51
SOX2-OT-202ENST00000461063 NKX2-5P52952 324 aaPredicted RBP5.64□□□□□ -1.51
SOX2-OT-202ENST00000461063 CACNG7P62955 275 aa5.64□□□□□ -1.51
SOX2-OT-202ENST00000461063 C20orf203Q8NBC4 194 aa5.64□□□□□ -1.51
SOX2-OT-202ENST00000461063 TRBV20OR9-2A0A075B6H5 130 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 IGLV4-60A0A075B6I1 120 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 TRAV8-4A0A0B4J246 113 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 F2Z2F3 143 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 P01737 135 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 GNG4P50150 75 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 RAB5CP51148 216 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 RASL11AQ6T310 242 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 LYZL1Q6UWQ5 148 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 SMIM12Q96EX1 92 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 TMEM243Q9BU79 118 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 GFRA4Q9GZZ7 299 aa5.63□□□□□ -1.51
SOX2-OT-202ENST00000461063 hDV102S1A0JD36 115 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 XKRY2A2RUG3 117 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 PDE6DO43924 150 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 IFNA1P01562 189 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 NTF3P20783 257 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 MEF2BQ02080 365 aaPredicted RBP5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 CIRBPQ14011 172 aaKnown RBP5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 C9orf62Q8N4C0 152 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 NIT2Q9NQR4 276 aa5.62□□□□□ -1.51
SOX2-OT-202ENST00000461063 H3BS24 57 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 TEX46H3BTG2 121 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 SLPIP03973 132 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 CTRLP40313 264 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 SULT1A2P50226 295 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 EIF5AL1Q6IS14 154 aaKnown RBP5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 WDR73Q6P4I2 378 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 NUDT10Q8NFP7 164 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 NUDT11Q96G61 164 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 DPH3P1Q9H4G8 78 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 MED9Q9NWA0 146 aa5.61□□□□□ -1.51
SOX2-OT-202ENST00000461063 IGHV3-64A0A075B6Q5 118 aa5.6□□□□□ -1.51
SOX2-OT-202ENST00000461063 BCL2P10415 239 aa5.6□□□□□ -1.51
SOX2-OT-202ENST00000461063 AMTP48728 403 aa5.6□□□□□ -1.51
SOX2-OT-202ENST00000461063 COTL1Q14019 142 aa5.6□□□□□ -1.51
SOX2-OT-202ENST00000461063 CNFNQ9BYD5 112 aa5.6□□□□□ -1.51
SOX2-OT-202ENST00000461063 BIN3Q9NQY0 253 aa5.6□□□□□ -1.51
SOX2-OT-202ENST00000461063 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 UBE2L6O14933 153 aa5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 TWIST1Q15672 202 aa5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 GATD1Q8NB37 220 aa5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 AP5S1Q9NUS5 200 aa5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 PLA2G2DQ9UNK4 145 aa5.59□□□□□ -1.51
SOX2-OT-202ENST00000461063 A0A087WYN8 130 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 TRAV26-2A0A0B4J265 109 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 K7EN84 100 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 SPACA4Q8TDM5 124 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 DPH3Q96FX2 82 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 RNF185Q96GF1 192 aa5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 RNASE7Q9H1E1 156 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 RPP21Q9H633 154 aaKnown RBP5.58□□□□□ -1.52
SOX2-OT-202ENST00000461063 Q6ZRU5 148 aa5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 SLC51BQ86UW2 128 aa5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 OCC1Q8TAD7 63 aa5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 GTSF1Q8WW33 167 aa5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 RPL39LQ96EH5 51 aaKnown RBP5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 TNXBP22105 4242 aa5.57□□□□□ -1.52
SOX2-OT-202ENST00000461063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 IGKV2-29A2NJV5 120 aaPredicted RBP5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 TAGLN2P37802 199 aaKnown RBP5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 FOXA3P55318 350 aaPredicted RBP5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 CFAP161Q6P656 301 aa5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 Q6ZNX1 250 aa5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 TCTE3Q8IZS6 198 aa5.56□□□□□ -1.52
SOX2-OT-202ENST00000461063 H7C423 109 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 NCR2O95944 276 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 FGF6P10767 208 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 RPS10P46783 165 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 COX6A2Q02221 97 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 AMMECR1LQ6DCA0 310 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 RNASEKQ6P5S7 137 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 SMIM15Q7Z3B0 74 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 CHCHD10Q8WYQ3 142 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-202ENST00000461063 GVQW2A0A096LPI5 108 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-202ENST00000461063 SDHAF1A6NFY7 115 aa5.54□□□□□ -1.52
SOX2-OT-202ENST00000461063 PHOX2AO14813 284 aa5.54□□□□□ -1.52
SOX2-OT-202ENST00000461063 APCSP02743 223 aa5.54□□□□□ -1.52
SOX2-OT-202ENST00000461063 FOXI1Q12951 378 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms