RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 C9JQL5 133 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 CIRBP-AS1Q8TBR5 109 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 RPP21Q9H633 154 aaKnown RBP10.24□□□□□ -0.77
CHCHD3-204ENST00000457942 UBE2L6O14933 153 aa10.23□□□□□ -0.77
CHCHD3-204ENST00000457942 REG3AQ06141 175 aa10.23□□□□□ -0.77
CHCHD3-204ENST00000457942 PRR34Q9NV39 138 aa10.23□□□□□ -0.77
CHCHD3-204ENST00000457942 GATCO43716 136 aaKnown RBP10.22□□□□□ -0.77
CHCHD3-204ENST00000457942 PRSS1P07477 247 aa10.22□□□□□ -0.77
CHCHD3-204ENST00000457942 NTF3P20783 257 aa10.22□□□□□ -0.77
CHCHD3-204ENST00000457942 TWIST1Q15672 202 aa10.22□□□□□ -0.77
CHCHD3-204ENST00000457942 PKHD1L1Q86WI1 4243 aa10.22□□□□□ -0.77
CHCHD3-204ENST00000457942 NIT2Q9NQR4 276 aa10.21□□□□□ -0.77
CHCHD3-204ENST00000457942 CTRLP40313 264 aa10.2□□□□□ -0.78
CHCHD3-204ENST00000457942 AMTP48728 403 aa10.2□□□□□ -0.78
CHCHD3-204ENST00000457942 COTL1Q14019 142 aa10.2□□□□□ -0.78
CHCHD3-204ENST00000457942 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
CHCHD3-204ENST00000457942 PEA15Q15121 130 aa10.19□□□□□ -0.78
CHCHD3-204ENST00000457942 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
CHCHD3-204ENST00000457942 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
CHCHD3-204ENST00000457942 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
CHCHD3-204ENST00000457942 C20orf203Q8NBC4 194 aa10.19□□□□□ -0.78
CHCHD3-204ENST00000457942 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
CHCHD3-204ENST00000457942 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
CHCHD3-204ENST00000457942 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
CHCHD3-204ENST00000457942 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
CHCHD3-204ENST00000457942 ADIRFQ15847 76 aa10.18□□□□□ -0.78
CHCHD3-204ENST00000457942 GTSF1Q8WW33 167 aa10.18□□□□□ -0.78
CHCHD3-204ENST00000457942 IGLV4-60A0A075B6I1 120 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 OXTP01178 125 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 KRTAP26-1Q6PEX3 210 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 C9orf163Q8N9P6 203 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 AP5S1Q9NUS5 200 aa10.17□□□□□ -0.78
CHCHD3-204ENST00000457942 IGKV3OR2-268A0A0C4DH90 116 aa10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 A0A1B0GUV1 79 aa10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 NDUFS6O75380 124 aaKnown RBP10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 RAB14P61106 215 aa10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 RPL37AP61513 92 aaKnown RBP10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 RPL23P62829 140 aaKnown RBP10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 GFRA4Q9GZZ7 299 aa10.16□□□□□ -0.78
CHCHD3-204ENST00000457942 IFITM2Q01629 132 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 TMEM241Q24JQ0 296 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 AMMECR1LQ6DCA0 310 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 GATD1Q8NB37 220 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 ISOC2Q96AB3 205 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 RNF213Q63HN8 5207 aa10.15□□□□□ -0.78
CHCHD3-204ENST00000457942 A8MWL6 223 aa10.14□□□□□ -0.79
CHCHD3-204ENST00000457942 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-204ENST00000457942 RPL39LQ96EH5 51 aaKnown RBP10.14□□□□□ -0.79
CHCHD3-204ENST00000457942 OSTCQ9NRP0 149 aa10.14□□□□□ -0.79
CHCHD3-204ENST00000457942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3-204ENST00000457942 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.13□□□□□ -0.79
CHCHD3-204ENST00000457942 APCSP02743 223 aa10.13□□□□□ -0.79
CHCHD3-204ENST00000457942 FAM74A3Q4VXF1 159 aa10.13□□□□□ -0.79
CHCHD3-204ENST00000457942 RNASEKQ6P5S7 137 aaKnown RBP10.13□□□□□ -0.79
CHCHD3-204ENST00000457942 BORCS7Q96B45 105 aa10.13□□□□□ -0.79
CHCHD3-204ENST00000457942 V9GYV3 84 aa10.13□□□□□ -0.79
CHCHD3-204ENST00000457942 CT83Q5H943 113 aa10.12□□□□□ -0.79
CHCHD3-204ENST00000457942 DPH3Q96FX2 82 aa10.12□□□□□ -0.79
CHCHD3-204ENST00000457942 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 IGKV2-29A2NJV5 120 aaPredicted RBP10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 HIGD1CA8MV81 97 aa10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 TSKUQ8WUA8 353 aa10.11□□□□□ -0.79
CHCHD3-204ENST00000457942 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
CHCHD3-204ENST00000457942 NCR2O95944 276 aa10.1□□□□□ -0.79
CHCHD3-204ENST00000457942 HNRNPA3P51991 378 aaKnown RBP10.1□□□□□ -0.79
CHCHD3-204ENST00000457942 CLLU1Q5K131 121 aa10.1□□□□□ -0.79
CHCHD3-204ENST00000457942 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
CHCHD3-204ENST00000457942 SMDT1Q9H4I9 107 aa10.1□□□□□ -0.79
CHCHD3-204ENST00000457942 PANO1I0J062 215 aa10.09□□□□□ -0.79
CHCHD3-204ENST00000457942 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
CHCHD3-204ENST00000457942 PMCHP20382 165 aa10.08□□□□□ -0.8
CHCHD3-204ENST00000457942 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
CHCHD3-204ENST00000457942 FGF6P10767 208 aa10.07□□□□□ -0.8
CHCHD3-204ENST00000457942 HIGD2BQ4VC39 106 aa10.07□□□□□ -0.8
CHCHD3-204ENST00000457942 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
CHCHD3-204ENST00000457942 CHCHD10Q8WYQ3 142 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3-204ENST00000457942 TMEM101Q96IK0 257 aa10.07□□□□□ -0.8
CHCHD3-204ENST00000457942 LRP2P98164 4655 aa10.07□□□□□ -0.8
CHCHD3-204ENST00000457942 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
CHCHD3-204ENST00000457942 H7C423 109 aa10.06□□□□□ -0.8
CHCHD3-204ENST00000457942 I3L3M4 83 aa10.06□□□□□ -0.8
CHCHD3-204ENST00000457942 CHTF8P0CG12 524 aa10.06□□□□□ -0.8
CHCHD3-204ENST00000457942 C15orf56Q8N910 161 aa10.06□□□□□ -0.8
CHCHD3-204ENST00000457942 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CHCHD3-204ENST00000457942 SLPIP03973 132 aa10.05□□□□□ -0.8
CHCHD3-204ENST00000457942 ST20Q9HBF5 79 aa10.05□□□□□ -0.8
CHCHD3-204ENST00000457942 TMEM242Q9NWH2 141 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms