RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, human

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3B-208	ENST00000456210	FBN2	P35556	2912 aa		13.97	□□□□□ -0.17
SEMA3B-208	ENST00000456210	MRPS36	P82909	103 aa	Known RBP	13.96	□□□□□ -0.17
SEMA3B-208	ENST00000456210	DEFB121	Q5J5C9	76 aa		13.96	□□□□□ -0.17
SEMA3B-208	ENST00000456210	TIMM21	Q9BVV7	248 aa		13.96	□□□□□ -0.17
SEMA3B-208	ENST00000456210	BEX4	Q9NWD9	120 aa	Predicted RBP	13.96	□□□□□ -0.17
SEMA3B-208	ENST00000456210	PTPN13	Q12923	2485 aa		13.95	□□□□□ -0.18
SEMA3B-208	ENST00000456210	IGHV3-11	P01762	117 aa		13.95	□□□□□ -0.18
SEMA3B-208	ENST00000456210	HIST2H2BC	Q6DN03	193 aa		13.94	□□□□□ -0.18
SEMA3B-208	ENST00000456210	VPS13C	Q709C8	3753 aa		13.94	□□□□□ -0.18
SEMA3B-208	ENST00000456210	ASH1L	Q9NR48	2969 aa	Known RBP	13.94	□□□□□ -0.18
SEMA3B-208	ENST00000456210	HECTD1	Q9ULT8	2610 aa		13.94	□□□□□ -0.18
SEMA3B-208	ENST00000456210	COX6C	P09669	75 aa		13.94	□□□□□ -0.18
SEMA3B-208	ENST00000456210	IGHV1-58	A0A0C4DH39	117 aa		13.93	□□□□□ -0.18
SEMA3B-208	ENST00000456210		K7EMT4	169 aa		13.93	□□□□□ -0.18
SEMA3B-208	ENST00000456210	IGHG2	P01859	326 aa		13.93	□□□□□ -0.18
SEMA3B-208	ENST00000456210	MIA	Q16674	131 aa		13.93	□□□□□ -0.18
SEMA3B-208	ENST00000456210	FAM104A	Q969W3	186 aa		13.93	□□□□□ -0.18
SEMA3B-208	ENST00000456210	EDA2R	Q9HAV5	297 aa		13.93	□□□□□ -0.18
SEMA3B-208	ENST00000456210	MAP1A	P78559	2803 aa	Predicted RBP	13.92	□□□□□ -0.18
SEMA3B-208	ENST00000456210	LST1	O00453	97 aa		13.92	□□□□□ -0.18
SEMA3B-208	ENST00000456210	FAM110A	Q9BQ89	295 aa		13.92	□□□□□ -0.18
SEMA3B-208	ENST00000456210	SPX	Q9BT56	116 aa		13.92	□□□□□ -0.18
SEMA3B-208	ENST00000456210	ADAMTSL4-AS1	Q5T5F5	129 aa		13.91	□□□□□ -0.18
SEMA3B-208	ENST00000456210	BPESC1	Q9GZL8	116 aa		13.91	□□□□□ -0.18
SEMA3B-208	ENST00000456210	ADARB2-AS1	A8MUL3	147 aa		13.91	□□□□□ -0.18
SEMA3B-208	ENST00000456210	CD28	P10747	220 aa		13.91	□□□□□ -0.18
SEMA3B-208	ENST00000456210	PRRC2A	P48634	2157 aa	Known RBP	13.9	□□□□□ -0.18
SEMA3B-208	ENST00000456210	IGHV1OR15-1	A0A075B7D0	117 aa		13.9	□□□□□ -0.18
SEMA3B-208	ENST00000456210	PF4V1	P10720	104 aa		13.9	□□□□□ -0.18
SEMA3B-208	ENST00000456210	NDUFA12	Q9UI09	145 aa		13.9	□□□□□ -0.18
SEMA3B-208	ENST00000456210	SPG11	Q96JI7	2443 aa		13.9	□□□□□ -0.19
SEMA3B-208	ENST00000456210	ABCA12	Q86UK0	2595 aa		13.89	□□□□□ -0.19
SEMA3B-208	ENST00000456210	PRSS2	P07478	247 aa		13.89	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TRAV8-3	A0A0A6YYJ7	113 aa		13.89	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TRBV7-7	A0A0K0K1E9	115 aa		13.89	□□□□□ -0.19
SEMA3B-208	ENST00000456210	IGLV1-40	P01703	118 aa		13.89	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TMEM61	Q8N0U2	210 aa		13.89	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TIMM17B	O60830	172 aa		13.88	□□□□□ -0.19
SEMA3B-208	ENST00000456210	EDN2	P20800	178 aa		13.88	□□□□□ -0.19
SEMA3B-208	ENST00000456210	VSIG2	Q96IQ7	327 aa		13.88	□□□□□ -0.19
SEMA3B-208	ENST00000456210	YAE1D1	Q9NRH1	226 aa		13.88	□□□□□ -0.19
SEMA3B-208	ENST00000456210	POLQ	O75417	2590 aa		13.88	□□□□□ -0.19
SEMA3B-208	ENST00000456210	MED13L	Q71F56	2210 aa		13.87	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TRAV12-2	A0A075B6T6	113 aa		13.87	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TINCR	A0A1B0GVN0	87 aa		13.87	□□□□□ -0.19
SEMA3B-208	ENST00000456210	IGHV3OR16-10	A0A075B7F0	116 aa		13.86	□□□□□ -0.19
SEMA3B-208	ENST00000456210	CLEC2B	Q92478	149 aa		13.86	□□□□□ -0.19
SEMA3B-208	ENST00000456210	APC	P25054	2843 aa		13.86	□□□□□ -0.19
SEMA3B-208	ENST00000456210	SVEP1	Q4LDE5	3571 aa		13.85	□□□□□ -0.19
SEMA3B-208	ENST00000456210	RNF152	Q8N8N0	203 aa		13.85	□□□□□ -0.19
SEMA3B-208	ENST00000456210		A6NDX4	124 aa		13.84	□□□□□ -0.19
SEMA3B-208	ENST00000456210	TRGV11	A0A075B6L2	103 aa		13.84	□□□□□ -0.19
SEMA3B-208	ENST00000456210	CFHR3	Q02985	330 aa		13.84	□□□□□ -0.19
SEMA3B-208	ENST00000456210	BRD3OS	Q6XYD6	125 aa		13.84	□□□□□ -0.19
SEMA3B-208	ENST00000456210		Q6ZSV7	163 aa		13.84	□□□□□ -0.19
SEMA3B-208	ENST00000456210	ITPR2	Q14571	2701 aa		13.84	□□□□□ -0.19
SEMA3B-208	ENST00000456210	SNRPD3	P62318	126 aa	Known RBP	13.83	□□□□□ -0.2
SEMA3B-208	ENST00000456210	DUX3	Q96PT4	197 aa		13.83	□□□□□ -0.2
SEMA3B-208	ENST00000456210	LY6E	Q16553	131 aa		13.82	□□□□□ -0.2
SEMA3B-208	ENST00000456210	SPINK13	Q1W4C9	94 aa		13.82	□□□□□ -0.2
SEMA3B-208	ENST00000456210	CCL19	Q99731	98 aa		13.82	□□□□□ -0.2
SEMA3B-208	ENST00000456210		K7EQG2	157 aa		13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	MEIG1	Q5JSS6	88 aa		13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	SMIM20	Q8N5G0	67 aa		13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	IGKV3-20	P01619	116 aa		13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	ACYP1	P07311	99 aa		13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	IMUP	Q9GZP8	106 aa		13.81	□□□□□ -0.2
SEMA3B-208	ENST00000456210	BLCAP	P62952	87 aa		13.8	□□□□□ -0.2
SEMA3B-208	ENST00000456210	NRGN	Q92686	78 aa		13.8	□□□□□ -0.2
SEMA3B-208	ENST00000456210	TMEM101	Q96IK0	257 aa		13.8	□□□□□ -0.2
SEMA3B-208	ENST00000456210	UBE2D4	Q9Y2X8	147 aa		13.8	□□□□□ -0.2
SEMA3B-208	ENST00000456210	BAHCC1	Q9P281	2608 aa		13.8	□□□□□ -0.2
SEMA3B-208	ENST00000456210		H3BUX3	64 aa		13.79	□□□□□ -0.2
SEMA3B-208	ENST00000456210	NPC2	P61916	151 aa		13.79	□□□□□ -0.2
SEMA3B-208	ENST00000456210	CHCHD7	Q9BUK0	85 aa		13.79	□□□□□ -0.2
SEMA3B-208	ENST00000456210	ZFHX3	Q15911	3703 aa		13.79	□□□□□ -0.2
SEMA3B-208	ENST00000456210	PIMREG	Q9BSJ6	248 aa		13.79	□□□□□ -0.2
SEMA3B-208	ENST00000456210	UNC79	Q9P2D8	2635 aa		13.79	□□□□□ -0.2
SEMA3B-208	ENST00000456210		A8MZ25	164 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	NDUFA1	O15239	70 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	HERV-K104	P63124	156 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	RNASE13	Q5GAN3	156 aa	Known RBP	13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	ABCA2	Q9BZC7	2435 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	FLNB	O75369	2602 aa	Known RBP	13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	CHCHD5	Q9BSY4	110 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	TMEM126A	Q9H061	195 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	TNFRSF18	Q9Y5U5	241 aa		13.78	□□□□□ -0.2
SEMA3B-208	ENST00000456210	CITED2	Q99967	270 aa	Predicted RBP	13.77	□□□□□ -0.21
SEMA3B-208	ENST00000456210	IGLV5-45	A0A087WSX0	123 aa		13.76	□□□□□ -0.21
SEMA3B-208	ENST00000456210	KRTAP10-9	P60411	292 aa		13.76	□□□□□ -0.21
SEMA3B-208	ENST00000456210	IGHV4-38-2	P0DP08	117 aa		13.76	□□□□□ -0.21
SEMA3B-208	ENST00000456210	LINC01587	Q99440	93 aa		13.76	□□□□□ -0.21
SEMA3B-208	ENST00000456210	SHISA2	Q6UWI4	295 aa		13.75	□□□□□ -0.21
SEMA3B-208	ENST00000456210	PROK1	P58294	105 aa		13.75	□□□□□ -0.21
SEMA3B-208	ENST00000456210	TIRAP	P58753	221 aa		13.75	□□□□□ -0.21
SEMA3B-208	ENST00000456210	PIK3CD-AS1	Q5SR53	167 aa		13.75	□□□□□ -0.21
SEMA3B-208	ENST00000456210	ANKRD17	O75179	2603 aa	Known RBP	13.74	□□□□□ -0.21
SEMA3B-208	ENST00000456210	NACA	E9PAV3	2078 aa		13.74	□□□□□ -0.21
SEMA3B-208	ENST00000456210	COX7A2L	O14548	114 aa		13.74	□□□□□ -0.21

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