RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 FBN2P35556 2912 aa13.97□□□□□ -0.17
SEMA3B-208ENST00000456210 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.17
SEMA3B-208ENST00000456210 DEFB121Q5J5C9 76 aa13.96□□□□□ -0.17
SEMA3B-208ENST00000456210 TIMM21Q9BVV7 248 aa13.96□□□□□ -0.17
SEMA3B-208ENST00000456210 BEX4Q9NWD9 120 aaPredicted RBP13.96□□□□□ -0.17
SEMA3B-208ENST00000456210 PTPN13Q12923 2485 aa13.95□□□□□ -0.18
SEMA3B-208ENST00000456210 IGHV3-11P01762 117 aa13.95□□□□□ -0.18
SEMA3B-208ENST00000456210 HIST2H2BCQ6DN03 193 aa13.94□□□□□ -0.18
SEMA3B-208ENST00000456210 VPS13CQ709C8 3753 aa13.94□□□□□ -0.18
SEMA3B-208ENST00000456210 ASH1LQ9NR48 2969 aaKnown RBP13.94□□□□□ -0.18
SEMA3B-208ENST00000456210 HECTD1Q9ULT8 2610 aa13.94□□□□□ -0.18
SEMA3B-208ENST00000456210 COX6CP09669 75 aa13.94□□□□□ -0.18
SEMA3B-208ENST00000456210 IGHV1-58A0A0C4DH39 117 aa13.93□□□□□ -0.18
SEMA3B-208ENST00000456210 K7EMT4 169 aa13.93□□□□□ -0.18
SEMA3B-208ENST00000456210 IGHG2P01859 326 aa13.93□□□□□ -0.18
SEMA3B-208ENST00000456210 MIAQ16674 131 aa13.93□□□□□ -0.18
SEMA3B-208ENST00000456210 FAM104AQ969W3 186 aa13.93□□□□□ -0.18
SEMA3B-208ENST00000456210 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
SEMA3B-208ENST00000456210 MAP1AP78559 2803 aaPredicted RBP13.92□□□□□ -0.18
SEMA3B-208ENST00000456210 LST1O00453 97 aa13.92□□□□□ -0.18
SEMA3B-208ENST00000456210 FAM110AQ9BQ89 295 aa13.92□□□□□ -0.18
SEMA3B-208ENST00000456210 SPXQ9BT56 116 aa13.92□□□□□ -0.18
SEMA3B-208ENST00000456210 ADAMTSL4-AS1Q5T5F5 129 aa13.91□□□□□ -0.18
SEMA3B-208ENST00000456210 BPESC1Q9GZL8 116 aa13.91□□□□□ -0.18
SEMA3B-208ENST00000456210 ADARB2-AS1A8MUL3 147 aa13.91□□□□□ -0.18
SEMA3B-208ENST00000456210 CD28P10747 220 aa13.91□□□□□ -0.18
SEMA3B-208ENST00000456210 PRRC2AP48634 2157 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-208ENST00000456210 IGHV1OR15-1A0A075B7D0 117 aa13.9□□□□□ -0.18
SEMA3B-208ENST00000456210 PF4V1P10720 104 aa13.9□□□□□ -0.18
SEMA3B-208ENST00000456210 NDUFA12Q9UI09 145 aa13.9□□□□□ -0.18
SEMA3B-208ENST00000456210 SPG11Q96JI7 2443 aa13.9□□□□□ -0.19
SEMA3B-208ENST00000456210 ABCA12Q86UK0 2595 aa13.89□□□□□ -0.19
SEMA3B-208ENST00000456210 PRSS2P07478 247 aa13.89□□□□□ -0.19
SEMA3B-208ENST00000456210 TRAV8-3A0A0A6YYJ7 113 aa13.89□□□□□ -0.19
SEMA3B-208ENST00000456210 TRBV7-7A0A0K0K1E9 115 aa13.89□□□□□ -0.19
SEMA3B-208ENST00000456210 IGLV1-40P01703 118 aa13.89□□□□□ -0.19
SEMA3B-208ENST00000456210 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
SEMA3B-208ENST00000456210 TIMM17BO60830 172 aa13.88□□□□□ -0.19
SEMA3B-208ENST00000456210 EDN2P20800 178 aa13.88□□□□□ -0.19
SEMA3B-208ENST00000456210 VSIG2Q96IQ7 327 aa13.88□□□□□ -0.19
SEMA3B-208ENST00000456210 YAE1D1Q9NRH1 226 aa13.88□□□□□ -0.19
SEMA3B-208ENST00000456210 POLQO75417 2590 aa13.88□□□□□ -0.19
SEMA3B-208ENST00000456210 MED13LQ71F56 2210 aa13.87□□□□□ -0.19
SEMA3B-208ENST00000456210 TRAV12-2A0A075B6T6 113 aa13.87□□□□□ -0.19
SEMA3B-208ENST00000456210 TINCRA0A1B0GVN0 87 aa13.87□□□□□ -0.19
SEMA3B-208ENST00000456210 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
SEMA3B-208ENST00000456210 CLEC2BQ92478 149 aa13.86□□□□□ -0.19
SEMA3B-208ENST00000456210 APCP25054 2843 aa13.86□□□□□ -0.19
SEMA3B-208ENST00000456210 SVEP1Q4LDE5 3571 aa13.85□□□□□ -0.19
SEMA3B-208ENST00000456210 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
SEMA3B-208ENST00000456210 A6NDX4 124 aa13.84□□□□□ -0.19
SEMA3B-208ENST00000456210 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
SEMA3B-208ENST00000456210 CFHR3Q02985 330 aa13.84□□□□□ -0.19
SEMA3B-208ENST00000456210 BRD3OSQ6XYD6 125 aa13.84□□□□□ -0.19
SEMA3B-208ENST00000456210 Q6ZSV7 163 aa13.84□□□□□ -0.19
SEMA3B-208ENST00000456210 ITPR2Q14571 2701 aa13.84□□□□□ -0.19
SEMA3B-208ENST00000456210 SNRPD3P62318 126 aaKnown RBP13.83□□□□□ -0.2
SEMA3B-208ENST00000456210 DUX3Q96PT4 197 aa13.83□□□□□ -0.2
SEMA3B-208ENST00000456210 LY6EQ16553 131 aa13.82□□□□□ -0.2
SEMA3B-208ENST00000456210 SPINK13Q1W4C9 94 aa13.82□□□□□ -0.2
SEMA3B-208ENST00000456210 CCL19Q99731 98 aa13.82□□□□□ -0.2
SEMA3B-208ENST00000456210 K7EQG2 157 aa13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 MEIG1Q5JSS6 88 aa13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 SMIM20Q8N5G0 67 aa13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 IGKV3-20P01619 116 aa13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 ACYP1P07311 99 aa13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 CEMP1Q6PRD7 247 aaPredicted RBP13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 IMUPQ9GZP8 106 aa13.81□□□□□ -0.2
SEMA3B-208ENST00000456210 BLCAPP62952 87 aa13.8□□□□□ -0.2
SEMA3B-208ENST00000456210 NRGNQ92686 78 aa13.8□□□□□ -0.2
SEMA3B-208ENST00000456210 TMEM101Q96IK0 257 aa13.8□□□□□ -0.2
SEMA3B-208ENST00000456210 UBE2D4Q9Y2X8 147 aa13.8□□□□□ -0.2
SEMA3B-208ENST00000456210 BAHCC1Q9P281 2608 aa13.8□□□□□ -0.2
SEMA3B-208ENST00000456210 H3BUX3 64 aa13.79□□□□□ -0.2
SEMA3B-208ENST00000456210 NPC2P61916 151 aa13.79□□□□□ -0.2
SEMA3B-208ENST00000456210 CHCHD7Q9BUK0 85 aa13.79□□□□□ -0.2
SEMA3B-208ENST00000456210 ZFHX3Q15911 3703 aa13.79□□□□□ -0.2
SEMA3B-208ENST00000456210 PIMREGQ9BSJ6 248 aa13.79□□□□□ -0.2
SEMA3B-208ENST00000456210 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
SEMA3B-208ENST00000456210 A8MZ25 164 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 NDUFA1O15239 70 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 HERV-K104P63124 156 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 RNASE13Q5GAN3 156 aaKnown RBP13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 ABCA2Q9BZC7 2435 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 FLNBO75369 2602 aaKnown RBP13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 TMEM126AQ9H061 195 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 TNFRSF18Q9Y5U5 241 aa13.78□□□□□ -0.2
SEMA3B-208ENST00000456210 CITED2Q99967 270 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-208ENST00000456210 IGLV5-45A0A087WSX0 123 aa13.76□□□□□ -0.21
SEMA3B-208ENST00000456210 KRTAP10-9P60411 292 aa13.76□□□□□ -0.21
SEMA3B-208ENST00000456210 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
SEMA3B-208ENST00000456210 LINC01587Q99440 93 aa13.76□□□□□ -0.21
SEMA3B-208ENST00000456210 SHISA2Q6UWI4 295 aa13.75□□□□□ -0.21
SEMA3B-208ENST00000456210 PROK1P58294 105 aa13.75□□□□□ -0.21
SEMA3B-208ENST00000456210 TIRAPP58753 221 aa13.75□□□□□ -0.21
SEMA3B-208ENST00000456210 PIK3CD-AS1Q5SR53 167 aa13.75□□□□□ -0.21
SEMA3B-208ENST00000456210 ANKRD17O75179 2603 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-208ENST00000456210 NACAE9PAV3 2078 aa13.74□□□□□ -0.21
SEMA3B-208ENST00000456210 COX7A2LO14548 114 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms