RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 F2Z2F3 143 aa8.48□□□□□ -1.05
CHD3-206ENST00000452447 TRBV25-1A0A075B6N4 114 aa8.47□□□□□ -1.05
CHD3-206ENST00000452447 ENHOQ6UWT2 76 aa8.47□□□□□ -1.05
CHD3-206ENST00000452447 SVBPQ8N300 66 aa8.47□□□□□ -1.05
CHD3-206ENST00000452447 TRBV20OR9-2A0A075B6H5 130 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 M0QY20 66 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 LINC01620Q4KN68 170 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 Q6ZSA8 131 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.06
CHD3-206ENST00000452447 CARHSP1Q9Y2V2 147 aaKnown RBP8.46□□□□□ -1.06
CHD3-206ENST00000452447 APOC3P02656 99 aa8.45□□□□□ -1.06
CHD3-206ENST00000452447 GAGE6Q13070 117 aa8.45□□□□□ -1.06
CHD3-206ENST00000452447 ADIRFQ15847 76 aa8.45□□□□□ -1.06
CHD3-206ENST00000452447 MIAQ16674 131 aa8.45□□□□□ -1.06
CHD3-206ENST00000452447 SUMO4Q6EEV6 95 aa8.45□□□□□ -1.06
CHD3-206ENST00000452447 LYZL1Q6UWQ5 148 aa8.45□□□□□ -1.06
CHD3-206ENST00000452447 IGHV1-24A0A0C4DH33 117 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 C9JQL5 133 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 C10orf91Q5T1B1 145 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 NUDT11Q96G61 164 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 PPP1R2P9O14990 202 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 NTF3P20783 257 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 RBX1P62877 108 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 RASL11AQ6T310 242 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 LINC01551Q86U37 167 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 DPH3P1Q9H4G8 78 aa8.44□□□□□ -1.06
CHD3-206ENST00000452447 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
CHD3-206ENST00000452447 RHEBQ15382 184 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 TWIST1Q15672 202 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 WDR73Q6P4I2 378 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 OCC1Q8TAD7 63 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
CHD3-206ENST00000452447 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
CHD3-206ENST00000452447 RAB5BP61020 215 aa8.42□□□□□ -1.06
CHD3-206ENST00000452447 RPL23P62829 140 aaKnown RBP8.42□□□□□ -1.06
CHD3-206ENST00000452447 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
CHD3-206ENST00000452447 RNASE7Q9H1E1 156 aaKnown RBP8.42□□□□□ -1.06
CHD3-206ENST00000452447 RPP21Q9H633 154 aaKnown RBP8.42□□□□□ -1.06
CHD3-206ENST00000452447 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
CHD3-206ENST00000452447 PRR34Q9NV39 138 aa8.42□□□□□ -1.06
CHD3-206ENST00000452447 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 CTRLP40313 264 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 FAM231DQ6ZW35 169 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 LINC00528Q8N1L1 170 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 ISOC2Q96AB3 205 aa8.41□□□□□ -1.06
CHD3-206ENST00000452447 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
CHD3-206ENST00000452447 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
CHD3-206ENST00000452447 CNFNQ9BYD5 112 aa8.4□□□□□ -1.06
CHD3-206ENST00000452447 CTDSP1Q9GZU7 261 aa8.4□□□□□ -1.06
CHD3-206ENST00000452447 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
CHD3-206ENST00000452447 K7EN84 100 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 UBE2L6O14933 153 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 REG3AQ06141 175 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 SMIM15Q7Z3B0 74 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 PGLYRP4Q96LB8 373 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 C5orf52A6NGY3 159 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 COTL1Q14019 142 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 CT83Q5H943 113 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 TMEM242Q9NWH2 141 aa8.39□□□□□ -1.07
CHD3-206ENST00000452447 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
CHD3-206ENST00000452447 A8MWL6 223 aa8.38□□□□□ -1.07
CHD3-206ENST00000452447 PRSS1P07477 247 aa8.38□□□□□ -1.07
CHD3-206ENST00000452447 DGAT2L7PQ6IED9 249 aa8.38□□□□□ -1.07
CHD3-206ENST00000452447 DEFB104AQ8WTQ1 72 aa8.38□□□□□ -1.07
CHD3-206ENST00000452447 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 AMTP48728 403 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 CIRBP-AS1Q8TBR5 109 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 RPS10P5Q9NQ39 176 aa8.37□□□□□ -1.07
CHD3-206ENST00000452447 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
CHD3-206ENST00000452447 TRAV26-2A0A0B4J265 109 aa8.36□□□□□ -1.07
CHD3-206ENST00000452447 FAM231BA6NCW3 169 aa8.36□□□□□ -1.07
CHD3-206ENST00000452447 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
CHD3-206ENST00000452447 BORCS7Q96B45 105 aa8.36□□□□□ -1.07
CHD3-206ENST00000452447 GFRA4Q9GZZ7 299 aa8.36□□□□□ -1.07
CHD3-206ENST00000452447 C7orf77A4D0Y5 90 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 IMMP2LQ96T52 175 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 J3QL48 77 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 CBY1Q9Y3M2 126 aa8.35□□□□□ -1.07
CHD3-206ENST00000452447 RAB4AP20338 218 aa8.34□□□□□ -1.07
CHD3-206ENST00000452447 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
CHD3-206ENST00000452447 RPL39LQ96EH5 51 aaKnown RBP8.34□□□□□ -1.07
CHD3-206ENST00000452447 SMCO4Q9NRQ5 59 aa8.34□□□□□ -1.07
CHD3-206ENST00000452447 NAT8BQ9UHF3 227 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms