RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 MIAQ16674 131 aa8.14□□□□□ -1.11
CPSF4-208ENST00000452047 GAGE6Q13070 117 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 FAM74A3Q4VXF1 159 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 KRTAP26-1Q6PEX3 210 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 SCXQ7RTU7 201 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
CPSF4-208ENST00000452047 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
CPSF4-208ENST00000452047 RPP21Q9H633 154 aaKnown RBP8.13□□□□□ -1.11
CPSF4-208ENST00000452047 IGHV1-24A0A0C4DH33 117 aa8.12□□□□□ -1.11
CPSF4-208ENST00000452047 C14orf177Q52M58 125 aa8.12□□□□□ -1.11
CPSF4-208ENST00000452047 CLPSL2Q6UWE3 100 aa8.12□□□□□ -1.11
CPSF4-208ENST00000452047 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
CPSF4-208ENST00000452047 PGLYRP4Q96LB8 373 aa8.12□□□□□ -1.11
CPSF4-208ENST00000452047 USP17L23D6RBM5 183 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 HLA-DQA1P01909 254 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 CHAC1Q9BUX1 264 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 SMCO4Q9NRQ5 59 aa8.11□□□□□ -1.11
CPSF4-208ENST00000452047 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
CPSF4-208ENST00000452047 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
CPSF4-208ENST00000452047 GTSF1Q8WW33 167 aa8.1□□□□□ -1.11
CPSF4-208ENST00000452047 TMEM243Q9BU79 118 aa8.1□□□□□ -1.11
CPSF4-208ENST00000452047 A0A1B0GUV1 79 aa8.09□□□□□ -1.11
CPSF4-208ENST00000452047 REG3AQ06141 175 aa8.09□□□□□ -1.11
CPSF4-208ENST00000452047 TWIST1Q15672 202 aa8.09□□□□□ -1.11
CPSF4-208ENST00000452047 GATD1Q8NB37 220 aa8.09□□□□□ -1.11
CPSF4-208ENST00000452047 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
CPSF4-208ENST00000452047 PRSS1P07477 247 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 RHEBQ15382 184 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 FAM231DQ6ZW35 169 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
CPSF4-208ENST00000452047 IGLV10-54A0A075B6I4 117 aa8.07□□□□□ -1.12
CPSF4-208ENST00000452047 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
CPSF4-208ENST00000452047 COTL1Q14019 142 aa8.07□□□□□ -1.12
CPSF4-208ENST00000452047 AMTP48728 403 aa8.06□□□□□ -1.12
CPSF4-208ENST00000452047 FOXA3P55318 350 aaPredicted RBP8.06□□□□□ -1.12
CPSF4-208ENST00000452047 DGAT2L7PQ6IED9 249 aa8.06□□□□□ -1.12
CPSF4-208ENST00000452047 CBLN2Q8IUK8 224 aa8.06□□□□□ -1.12
CPSF4-208ENST00000452047 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
CPSF4-208ENST00000452047 A8MWL6 223 aa8.05□□□□□ -1.12
CPSF4-208ENST00000452047 C9JQL5 133 aa8.05□□□□□ -1.12
CPSF4-208ENST00000452047 GATCO43716 136 aaKnown RBP8.05□□□□□ -1.12
CPSF4-208ENST00000452047 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
CPSF4-208ENST00000452047 MT-ND4LP03901 98 aa8.05□□□□□ -1.12
CPSF4-208ENST00000452047 CT83Q5H943 113 aa8.05□□□□□ -1.12
CPSF4-208ENST00000452047 C9orf163Q8N9P6 203 aa8.05□□□□□ -1.12
CPSF4-208ENST00000452047 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
CPSF4-208ENST00000452047 EIF5A2Q9GZV4 153 aaKnown RBP8.05□□□□□ -1.12
CPSF4-208ENST00000452047 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
CPSF4-208ENST00000452047 COLCA2A8K830 154 aa8.04□□□□□ -1.12
CPSF4-208ENST00000452047 UBE2L6O14933 153 aa8.04□□□□□ -1.12
CPSF4-208ENST00000452047 CEBPGP53567 150 aa8.04□□□□□ -1.12
CPSF4-208ENST00000452047 RAB5BP61020 215 aa8.04□□□□□ -1.12
CPSF4-208ENST00000452047 LINC01551Q86U37 167 aa8.04□□□□□ -1.12
CPSF4-208ENST00000452047 C7orf77A4D0Y5 90 aa8.03□□□□□ -1.12
CPSF4-208ENST00000452047 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
CPSF4-208ENST00000452047 LINC00518Q8N0U6 118 aa8.03□□□□□ -1.12
CPSF4-208ENST00000452047 SMIM7Q9BQ49 75 aa8.03□□□□□ -1.12
CPSF4-208ENST00000452047 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.13
CPSF4-208ENST00000452047 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
CPSF4-208ENST00000452047 NCR2O95944 276 aa8.02□□□□□ -1.13
CPSF4-208ENST00000452047 CNBPP62633 177 aaKnown RBP8.02□□□□□ -1.13
CPSF4-208ENST00000452047 SDIM1Q6ZPB5 146 aa8.02□□□□□ -1.13
CPSF4-208ENST00000452047 RPS10P5Q9NQ39 176 aa8.02□□□□□ -1.13
CPSF4-208ENST00000452047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
CPSF4-208ENST00000452047 TRBV6-5A0A0K0K1A5 114 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 ZNF727A8MUV8 499 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 HIGD1CA8MV81 97 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 PANO1I0J062 215 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 GAS8-AS1O95177 125 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 SLPIP03973 132 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 SRP19P09132 144 aaKnown RBP8.01□□□□□ -1.13
CPSF4-208ENST00000452047 TSKUQ8WUA8 353 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
CPSF4-208ENST00000452047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8□□□□□ -1.13
CPSF4-208ENST00000452047 A0A1B0GUT8 65 aa8□□□□□ -1.13
CPSF4-208ENST00000452047 hDV102S1A0JD36 115 aa8□□□□□ -1.13
CPSF4-208ENST00000452047 IGKV2-29A2NJV5 120 aaPredicted RBP8□□□□□ -1.13
CPSF4-208ENST00000452047 FAM231BA6NCW3 169 aa8□□□□□ -1.13
CPSF4-208ENST00000452047 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
CPSF4-208ENST00000452047 H7C423 109 aa8□□□□□ -1.13
CPSF4-208ENST00000452047 APCSP02743 223 aa8□□□□□ -1.13
CPSF4-208ENST00000452047 C15orf56Q8N910 161 aa8□□□□□ -1.13
CPSF4-208ENST00000452047 S100A8P05109 93 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 FGF6P10767 208 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 RAB5AP20339 215 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 S100A12P80511 92 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 PNRC1Q12796 327 aaPredicted RBP7.99□□□□□ -1.13
CPSF4-208ENST00000452047 CIRBPQ14011 172 aaKnown RBP7.99□□□□□ -1.13
CPSF4-208ENST00000452047 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
CPSF4-208ENST00000452047 RNF185Q96GF1 192 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms