RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 IGLC6P0CF74 106 aa7.26□□□□□ -1.25
NPIPB3-202ENST00000448012 C19orf71A6NCJ1 209 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 COLCA2A8K830 154 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 GAGE6Q13070 117 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 MIAQ16674 131 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 MPV17L2Q567V2 206 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 LINC01551Q86U37 167 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 DPH3P1Q9H4G8 78 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 TMEM242Q9NWH2 141 aa7.25□□□□□ -1.25
NPIPB3-202ENST00000448012 UBE2L6O14933 153 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 IGLV2-8P01709 118 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 HAMPP81172 84 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 WFDC2Q14508 124 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 TWIST1Q15672 202 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 SUMO4Q6EEV6 95 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 BORCS7Q96B45 105 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 RPP21Q9H633 154 aaKnown RBP7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 KIF25-AS1Q9Y6Z4 181 aa7.24□□□□□ -1.25
NPIPB3-202ENST00000448012 TRBV20OR9-2A0A075B6H5 130 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 M0QY20 66 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 PLA2G1BP04054 148 aaKnown RBP7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 RAB5AP20339 215 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 NTF3P20783 257 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 S100PP25815 95 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 NUDT10Q8NFP7 164 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 NUDT11Q96G61 164 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
NPIPB3-202ENST00000448012 CTRLP40313 264 aa7.22□□□□□ -1.25
NPIPB3-202ENST00000448012 RBX1P62877 108 aa7.22□□□□□ -1.25
NPIPB3-202ENST00000448012 COTL1Q14019 142 aa7.22□□□□□ -1.25
NPIPB3-202ENST00000448012 IQCJQ1A5X6 159 aa7.22□□□□□ -1.25
NPIPB3-202ENST00000448012 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
NPIPB3-202ENST00000448012 DNAH5Q8TE73 4624 aa7.21□□□□□ -1.25
NPIPB3-202ENST00000448012 C1orf196B1AJZ1 125 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 GATCO43716 136 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 AMTP48728 403 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 RAB5BP61020 215 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 CLPSL2Q6UWE3 100 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 LINC00269Q8N2A0 174 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 OCC1Q8TAD7 63 aa7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 RNASE7Q9H1E1 156 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 APOBP04114 4563 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-202ENST00000448012 TRBV24-1A0A075B6N3 115 aa7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 A8MWL6 223 aa7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 BTF3L4Q96K17 158 aa7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 PGLYRP4Q96LB8 373 aa7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 FAM30AQ9NZY2 134 aa7.2□□□□□ -1.26
NPIPB3-202ENST00000448012 TGIF2-C20orf24A0A0A6YYL0 155 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 K7EN84 100 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 REG3AQ06141 175 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 AMMECR1LQ6DCA0 310 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 IMMP2LQ96T52 175 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
NPIPB3-202ENST00000448012 TRAV9-1A0A075B6T8 112 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 RPS10P46783 165 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 LINC01620Q4KN68 170 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 Q6ZSA8 131 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 CNFNQ9BYD5 112 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 OSTCQ9NRP0 149 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
NPIPB3-202ENST00000448012 ABCA13Q86UQ4 5058 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 IGLV10-54A0A075B6I4 117 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 A0A1B0GUV1 79 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 LOC105371267A0A1B0GV96 52 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 NCR2O95944 276 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 FAM231DQ6ZW35 169 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 CHAC1Q9BUX1 264 aa7.17□□□□□ -1.26
NPIPB3-202ENST00000448012 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-202ENST00000448012 APCSP02743 223 aa7.16□□□□□ -1.26
NPIPB3-202ENST00000448012 CT83Q5H943 113 aa7.16□□□□□ -1.26
NPIPB3-202ENST00000448012 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
NPIPB3-202ENST00000448012 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
NPIPB3-202ENST00000448012 V9GYV3 84 aa7.16□□□□□ -1.26
NPIPB3-202ENST00000448012 TRAV26-2A0A0B4J265 109 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 hDV102S1A0JD36 115 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 PMCHP20382 165 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 RNASEKQ6P5S7 137 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 GATD1Q8NB37 220 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 C20orf203Q8NBC4 194 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 DEFB104AQ8WTQ1 72 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 TMEM101Q96IK0 257 aa7.15□□□□□ -1.26
NPIPB3-202ENST00000448012 IGKV3OR2-268A0A0C4DH90 116 aa7.14□□□□□ -1.27
NPIPB3-202ENST00000448012 H7C423 109 aa7.14□□□□□ -1.27
NPIPB3-202ENST00000448012 PRSS1P07477 247 aa7.14□□□□□ -1.27
NPIPB3-202ENST00000448012 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
NPIPB3-202ENST00000448012 GTSF1Q8WW33 167 aa7.14□□□□□ -1.27
NPIPB3-202ENST00000448012 DPH3Q96FX2 82 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms