RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 POM121L12Q8N7R1 296 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 OR5A1Q8NGJ0 315 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 C4orf3Q8WVX3 66 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 RNF185Q96GF1 192 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 URB1-AS1Q96HZ7 61 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 FAM19A4Q96LR4 140 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 TIMM17AQ99595 171 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 ZMAT4Q9H898 229 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 EDA2RQ9HAV5 297 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
PTPN3-205ENST00000447271 TNFRSF18Q9Y5U5 241 aa4.31□□□□□ -1.72
PTPN3-205ENST00000447271 hDV102S1A0JD36 115 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 CBY3A6NI87 242 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 I3L3M4 83 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 K7EQG2 157 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 NXPH4O95158 308 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 HLA-DMBP28068 263 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 SYNJ2BPP57105 145 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 EGFEM1PQ0D2K5 195 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 PMVKQ15126 192 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 MPV17L2Q567V2 206 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 BVES-AS1Q5T3Y7 98 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 C14orf178Q8N769 122 aaPredicted RBP4.3□□□□□ -1.72
PTPN3-205ENST00000447271 DCANP1Q8TF63 244 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 LINC00467Q9BRT7 94 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 VCX2Q9H322 139 aa4.3□□□□□ -1.72
PTPN3-205ENST00000447271 MUC21A0A0G2JKD1 596 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 TRBV27A0A0K0K1C4 114 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 MUC21A0A140T8X8 626 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 EPM2AB3EWF7 344 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 M0R2P5 195 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 HOXA3O43365 443 aaPredicted RBP4.29□□□□□ -1.72
PTPN3-205ENST00000447271 SRSF9Q13242 221 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN3-205ENST00000447271 ZNF876PQ49A33 203 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 MUC21Q5SSG8 566 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 HIST1H4GQ99525 98 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 FAM110AQ9BQ89 295 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 MSRB1Q9NZV6 116 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 DNAH2Q9P225 4427 aa4.29□□□□□ -1.72
PTPN3-205ENST00000447271 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 TRAV12-3A0A0B4J271 114 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 MYMXA0A1B0GTQ4 84 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 J3KRW8 73 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 NCR2O95944 276 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 INSP01308 110 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 ZNF688P0C7X2 276 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 CIRBPQ14011 172 aaKnown RBP4.28□□□□□ -1.72
PTPN3-205ENST00000447271 ODF1Q14990 250 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 KHDC1LQ5JSQ8 128 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 SCGB1D4Q6XE38 83 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 LINC00336Q6ZUF6 198 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 Q6ZVH6 145 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 STHQ8IWL8 128 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 STPG4Q8N801 248 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 C11orf44Q8N8P7 122 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 NRACQ8N912 160 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 LINC01587Q99440 93 aa4.28□□□□□ -1.72
PTPN3-205ENST00000447271 TSSC4Q9Y5U2 329 aaPredicted RBP4.28□□□□□ -1.72
PTPN3-205ENST00000447271 PKD1P98161 4303 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 ARHGAP32A7KAX9 2087 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 IGLV2-18A0A075B6J9 118 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 IGHV3-16A0A0C4DH30 117 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 E9PLD3 99 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 SMKR1H3BMG3 65 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 GNRH2O43555 120 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 TFPI2P48307 235 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 POLR2KP53803 58 aaKnown RBP4.27□□□□□ -1.73
PTPN3-205ENST00000447271 ZNF56Q15929 161 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 NSUN5P1Q3KNT7 163 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 DGAT2L7PQ6IED9 249 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 MORN3Q6PF18 240 aaPredicted RBP4.27□□□□□ -1.73
PTPN3-205ENST00000447271 ZFP2Q6ZN57 461 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 DUX3Q96PT4 197 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 TM2D2Q9BX73 214 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 HHLA3Q9XRX5 114 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
PTPN3-205ENST00000447271 TRBV20-1A0A075B6N2 111 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.26□□□□□ -1.73
PTPN3-205ENST00000447271 TRAV8-6A0A0B4J262 113 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 TRBV10-1A0A0K0K1A3 114 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 SDHAF1A6NFY7 115 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 PRSS29PA6NIE9 313 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 F8W1H4 67 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 K7EP13 123 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 TRBV12-3P01733 135 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 RNASE3P12724 160 aaKnown RBP4.26□□□□□ -1.73
PTPN3-205ENST00000447271 LGALS3P17931 250 aaKnown RBP4.26□□□□□ -1.73
PTPN3-205ENST00000447271 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
PTPN3-205ENST00000447271 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 CEND1Q8N111 149 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
PTPN3-205ENST00000447271 RASL10AQ92737 203 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms