RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 ANGP03950 147 aaKnown RBP7.38□□□□□ -1.23
CDCA3-203ENST00000446553 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
CDCA3-203ENST00000446553 SUMO4Q6EEV6 95 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 LYZL1Q6UWQ5 148 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 C15orf54Q8N8G6 183 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 OCC1Q8TAD7 63 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 PGLYRP4Q96LB8 373 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 TPPP3Q9BW30 176 aa7.38□□□□□ -1.23
CDCA3-203ENST00000446553 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 MT-ND4LP03901 98 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 NTF3P20783 257 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 SSTP61278 116 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 RBX1P62877 108 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 RHEBQ15382 184 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 ADIRFQ15847 76 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 NIT2Q9NQR4 276 aa7.37□□□□□ -1.23
CDCA3-203ENST00000446553 K7EN84 100 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 PPP1R2P9O14990 202 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 PLA2G1BP04054 148 aaKnown RBP7.36□□□□□ -1.23
CDCA3-203ENST00000446553 MGPP08493 103 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 DGAT2L7PQ6IED9 249 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 FAM231DQ6ZW35 169 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 ISOC2Q96AB3 205 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 CHAC1Q9BUX1 264 aa7.36□□□□□ -1.23
CDCA3-203ENST00000446553 RPP21Q9H633 154 aaKnown RBP7.36□□□□□ -1.23
CDCA3-203ENST00000446553 TRAV8-4A0A0B4J246 113 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 HAMPP81172 84 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 KRTAP26-1Q6PEX3 210 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 OSTCQ9NRP0 149 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 TMEM242Q9NWH2 141 aa7.35□□□□□ -1.23
CDCA3-203ENST00000446553 C7orf77A4D0Y5 90 aa7.34□□□□□ -1.23
CDCA3-203ENST00000446553 USP17L23D6RBM5 183 aa7.34□□□□□ -1.23
CDCA3-203ENST00000446553 FOXA3P55318 350 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-203ENST00000446553 GAGE6Q13070 117 aa7.34□□□□□ -1.23
CDCA3-203ENST00000446553 CT83Q5H943 113 aa7.34□□□□□ -1.23
CDCA3-203ENST00000446553 LINC00269Q8N2A0 174 aa7.34□□□□□ -1.23
CDCA3-203ENST00000446553 TMEM243Q9BU79 118 aa7.34□□□□□ -1.23
CDCA3-203ENST00000446553 REG3AQ06141 175 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 COTL1Q14019 142 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 TWIST1Q15672 202 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 SCXQ7RTU7 201 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 LINC00528Q8N1L1 170 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 C20orf203Q8NBC4 194 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
CDCA3-203ENST00000446553 RPS10P5Q9NQ39 176 aa7.33□□□□□ -1.24
CDCA3-203ENST00000446553 A8MWL6 223 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 NCR2O95944 276 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 SMIM15Q7Z3B0 74 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 GATD1Q8NB37 220 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 IMMP2LQ96T52 175 aa7.32□□□□□ -1.24
CDCA3-203ENST00000446553 FAM231BA6NCW3 169 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 H7C423 109 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 GATCO43716 136 aaKnown RBP7.31□□□□□ -1.24
CDCA3-203ENST00000446553 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 PRSS1P07477 247 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 CIRBP-AS1Q8TBR5 109 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 SMCO4Q9NRQ5 59 aa7.31□□□□□ -1.24
CDCA3-203ENST00000446553 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
CDCA3-203ENST00000446553 AMTP48728 403 aa7.3□□□□□ -1.24
CDCA3-203ENST00000446553 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
CDCA3-203ENST00000446553 GFRA4Q9GZZ7 299 aa7.3□□□□□ -1.24
CDCA3-203ENST00000446553 V9GYV3 84 aa7.3□□□□□ -1.24
CDCA3-203ENST00000446553 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
CDCA3-203ENST00000446553 UBE2L6O14933 153 aa7.29□□□□□ -1.24
CDCA3-203ENST00000446553 S100PP25815 95 aa7.29□□□□□ -1.24
CDCA3-203ENST00000446553 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
CDCA3-203ENST00000446553 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
CDCA3-203ENST00000446553 SMIM27A0A1W2PRY6 76 aa7.28□□□□□ -1.24
CDCA3-203ENST00000446553 KRTAP29-1A8MX34 341 aaPredicted RBP7.28□□□□□ -1.24
CDCA3-203ENST00000446553 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
CDCA3-203ENST00000446553 TRAV9-1A0A075B6T8 112 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 TRAV26-2A0A0B4J265 109 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 SDHAF1A6NFY7 115 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
CDCA3-203ENST00000446553 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 BORCS7Q96B45 105 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 BTF3L4Q96K17 158 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 NAT8BQ9UHF3 227 aa7.27□□□□□ -1.25
CDCA3-203ENST00000446553 IGLV10-54A0A075B6I4 117 aa7.26□□□□□ -1.25
CDCA3-203ENST00000446553 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.26□□□□□ -1.25
CDCA3-203ENST00000446553 A0A1B0GUT8 65 aa7.26□□□□□ -1.25
CDCA3-203ENST00000446553 APCSP02743 223 aa7.26□□□□□ -1.25
CDCA3-203ENST00000446553 ZNF25P17030 456 aaPredicted RBP7.26□□□□□ -1.25
CDCA3-203ENST00000446553 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
CDCA3-203ENST00000446553 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
CDCA3-203ENST00000446553 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
CDCA3-203ENST00000446553 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
CDCA3-203ENST00000446553 LRP1Q07954 4544 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms