RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ANAPC13Q9BS18 74 aa10.46□□□□□ -0.73
ERCC3-203ENST00000445889 CD28P10747 220 aa10.46□□□□□ -0.74
ERCC3-203ENST00000445889 SONP18583 2426 aaKnown RBP10.45□□□□□ -0.74
ERCC3-203ENST00000445889 A0A0J9YXY3 114 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 I3L3M4 83 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 A0A0U1RRA0 63 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 UCNP55089 124 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 DEFB112Q30KQ8 113 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 ZFAND6Q6FIF0 208 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 ABCA12Q86UK0 2595 aa10.45□□□□□ -0.74
ERCC3-203ENST00000445889 CRLF1O75462 422 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 MSMBP08118 114 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 NSUN5P1Q3KNT7 163 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 Q6ZSN1 163 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.44□□□□□ -0.74
ERCC3-203ENST00000445889 IGKV2-29A2NJV5 120 aaPredicted RBP10.44□□□□□ -0.74
ERCC3-203ENST00000445889 PSMB8P28062 276 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 AKAP9Q99996 3911 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 TRIAP1O43715 76 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 CFHR3Q02985 330 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
ERCC3-203ENST00000445889 TRAV4A0A0B4J268 109 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 RHOHQ15669 191 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 FAM104AQ969W3 186 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 NF1P21359 2839 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 H3BUA1 57 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 K7EQG2 157 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 LINC01620Q4KN68 170 aa10.43□□□□□ -0.74
ERCC3-203ENST00000445889 EPG5Q9HCE0 2579 aa10.42□□□□□ -0.74
ERCC3-203ENST00000445889 TEX15Q9BXT5 2789 aa10.42□□□□□ -0.74
ERCC3-203ENST00000445889 CHD6Q8TD26 2715 aa10.42□□□□□ -0.74
ERCC3-203ENST00000445889 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
ERCC3-203ENST00000445889 A0A0B4J2C4 111 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 K7EMT4 169 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 M0R2P5 195 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 DEFB131AP59861 70 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 ATXN8Q156A1 80 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 ZNF625Q96I27 306 aaPredicted RBP10.41□□□□□ -0.74
ERCC3-203ENST00000445889 CLEC2BQ92478 149 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
ERCC3-203ENST00000445889 SNCGO76070 127 aa10.4□□□□□ -0.74
ERCC3-203ENST00000445889 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.4□□□□□ -0.74
ERCC3-203ENST00000445889 LRRK2Q5S007 2527 aa10.4□□□□□ -0.74
ERCC3-203ENST00000445889 HOXD3P31249 432 aaPredicted RBP10.4□□□□□ -0.75
ERCC3-203ENST00000445889 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.75
ERCC3-203ENST00000445889 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.75
ERCC3-203ENST00000445889 B5MCH6 92 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 SLURP1P55000 103 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 ANKRD17O75179 2603 aaKnown RBP10.39□□□□□ -0.75
ERCC3-203ENST00000445889 DOPEY1Q5JWR5 2465 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 BRI3O95415 125 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 LITAFQ99732 161 aa10.39□□□□□ -0.75
ERCC3-203ENST00000445889 NAV2Q8IVL1 2488 aa10.38□□□□□ -0.75
ERCC3-203ENST00000445889 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
ERCC3-203ENST00000445889 CITED1Q99966 193 aa10.37□□□□□ -0.75
ERCC3-203ENST00000445889 IGHV3OR16-12A0A075B7B8 117 aa10.37□□□□□ -0.75
ERCC3-203ENST00000445889 NDUFA7O95182 113 aa10.37□□□□□ -0.75
ERCC3-203ENST00000445889 ICOSQ9Y6W8 199 aa10.37□□□□□ -0.75
ERCC3-203ENST00000445889 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
ERCC3-203ENST00000445889 NHLRC4P0CG21 123 aaPredicted RBP10.37□□□□□ -0.75
ERCC3-203ENST00000445889 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
ERCC3-203ENST00000445889 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
ERCC3-203ENST00000445889 RBMY1BA6NDE4 496 aaKnown RBP10.36□□□□□ -0.75
ERCC3-203ENST00000445889 RBMY1EA6NEQ0 496 aaKnown RBP10.36□□□□□ -0.75
ERCC3-203ENST00000445889 RBMY1DP0C7P1 496 aaKnown RBP10.36□□□□□ -0.75
ERCC3-203ENST00000445889 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
ERCC3-203ENST00000445889 PIEZO1Q92508 2521 aa10.36□□□□□ -0.75
ERCC3-203ENST00000445889 TRBV10-2A0A0K0K1G8 114 aa10.36□□□□□ -0.75
ERCC3-203ENST00000445889 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.36□□□□□ -0.75
ERCC3-203ENST00000445889 ZNF469Q96JG9 3925 aaPredicted RBP10.36□□□□□ -0.75
ERCC3-203ENST00000445889 IGHV1-58A0A0C4DH39 117 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 TRBV30A0A0K0K1B3 111 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 H3BMM0 161 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 H7C423 109 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 MRPS36P82909 103 aaKnown RBP10.35□□□□□ -0.75
ERCC3-203ENST00000445889 TTC32Q5I0X7 151 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 C15orf53Q8NAA6 179 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 CCDC168Q8NDH2 2452 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 CDKN2A-AS1Q9UH64 79 aa10.35□□□□□ -0.75
ERCC3-203ENST00000445889 B4DSR2 109 aa10.34□□□□□ -0.75
ERCC3-203ENST00000445889 ODF3Q96PU9 254 aa10.34□□□□□ -0.75
ERCC3-203ENST00000445889 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
ERCC3-203ENST00000445889 NDUFV3P56181 108 aaKnown RBP10.34□□□□□ -0.75
ERCC3-203ENST00000445889 VSIG2Q96IQ7 327 aa10.34□□□□□ -0.75
ERCC3-203ENST00000445889 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
ERCC3-203ENST00000445889 GAGE5Q13069 117 aa10.33□□□□□ -0.76
ERCC3-203ENST00000445889 GAGE6Q13070 117 aa10.33□□□□□ -0.76
ERCC3-203ENST00000445889 LINC01587Q99440 93 aa10.33□□□□□ -0.76
ERCC3-203ENST00000445889 COX6A2Q02221 97 aa10.33□□□□□ -0.76
ERCC3-203ENST00000445889 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
ERCC3-203ENST00000445889 COX6CP09669 75 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms