RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 VSIG2Q96IQ7 327 aa3.48□□□□□ -1.85
CCDC140-202ENST00000440903 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
CCDC140-202ENST00000440903 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
CCDC140-202ENST00000440903 STAB2Q8WWQ8 2551 aa3.48□□□□□ -1.85
CCDC140-202ENST00000440903 HUWE1Q7Z6Z7 4374 aaKnown RBP3.47□□□□□ -1.85
CCDC140-202ENST00000440903 A0A096LPF7 62 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 IGHV1-24A0A0C4DH33 117 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 SMKR1H3BMG3 65 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 I3L3M4 83 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 K7EMI3 77 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 VCYO14598 125 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 SCO1O75880 301 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 TIRAPP58753 221 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 LINC00315P59091 139 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 UBE2D3P61077 147 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 UBE2D2P62837 147 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 TTC32Q5I0X7 151 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 CASC10Q5T4H9 136 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 ZNF575Q86XF7 245 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 PRSS3P2Q8NHM4 247 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 RPL39LQ96EH5 51 aaKnown RBP3.47□□□□□ -1.85
CCDC140-202ENST00000440903 RNF185Q96GF1 192 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 GTSF1LQ9H1H1 148 aa3.47□□□□□ -1.85
CCDC140-202ENST00000440903 NXT2Q9NPJ8 142 aaKnown RBP3.47□□□□□ -1.85
CCDC140-202ENST00000440903 PRKDCP78527 4128 aaKnown RBP3.46□□□□□ -1.85
CCDC140-202ENST00000440903 NBEAL2Q6ZNJ1 2754 aa3.46□□□□□ -1.85
CCDC140-202ENST00000440903 TRAV9-2A0A087WT02 112 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 A0A087WX48 190 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 IGHV3-38A0A0C4DH36 116 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 LOC100131303A0A0U1RQF7 123 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 LINC01549A6NIU2 74 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 C1orf196B1AJZ1 125 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 NPYP01303 97 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 CRPP02741 224 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 RPL32P62910 135 aaKnown RBP3.46□□□□□ -1.86
CCDC140-202ENST00000440903 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 LELP1Q5T871 98 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 AMMECR1LQ6DCA0 310 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 DGAT2L7PQ6IED9 249 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 Q6ZSN1 163 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 BAGE3Q86Y29 109 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 C10orf126Q8N4M7 172 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 CHCHD5Q9BSY4 110 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 TMEM243Q9BU79 118 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 TMEM70Q9BUB7 260 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 APLNQ9ULZ1 77 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 MRPS16Q9Y3D3 137 aaKnown RBP3.46□□□□□ -1.86
CCDC140-202ENST00000440903 TENM3Q9P273 2699 aa3.46□□□□□ -1.86
CCDC140-202ENST00000440903 MUC4Q99102 2169 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 TRBV27A0A0K0K1C4 114 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 TMEM262E9PQX1 116 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 K7EP13 123 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 SIVA1O15304 175 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 HSBP1O75506 76 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 TRGC2P03986 189 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 LINC00694P0DN24 101 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
CCDC140-202ENST00000440903 KIAA1644Q3SXP7 199 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 RNASEKQ6P5S7 137 aaKnown RBP3.45□□□□□ -1.86
CCDC140-202ENST00000440903 Q8N8P6 123 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 NRACQ8N912 160 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 YPEL4Q96NS1 127 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 ALKBH7Q9BT30 221 aaPredicted RBP3.45□□□□□ -1.86
CCDC140-202ENST00000440903 CHCHD7Q9BUK0 85 aa3.45□□□□□ -1.86
CCDC140-202ENST00000440903 COLCA2A8K830 154 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 H7C423 109 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 LY6G6CO95867 125 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 ZNF25P17030 456 aaPredicted RBP3.44□□□□□ -1.86
CCDC140-202ENST00000440903 BTF3P20290 206 aaKnown RBP3.44□□□□□ -1.86
CCDC140-202ENST00000440903 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
CCDC140-202ENST00000440903 LAGE3Q14657 143 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 IQCJQ1A5X6 159 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 PAPPA-AS1Q5QFB9 102 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 LGALS9CQ6DKI2 356 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 LYPD5Q6UWN5 251 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 Q6ZN92 141 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 OR5A1Q8NGJ0 315 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 LINC00476Q8WZB0 136 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 RMI2Q96E14 147 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 UPK3BQ9BT76 320 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 CDIP1Q9H305 208 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 CYSLTR1Q9Y271 337 aa3.44□□□□□ -1.86
CCDC140-202ENST00000440903 PRSS47A8MTI9 375 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 TSHBP01222 138 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 HBDP02042 147 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 S100A6P06703 90 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 GAGE6Q13070 117 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 ESRGQ1W209 222 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 WFDC10BQ8IUB3 73 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 C18orf32Q8TCD1 76 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 CHCHD1Q96BP2 118 aaKnown RBP3.43□□□□□ -1.86
CCDC140-202ENST00000440903 C2orf88Q9BSF0 95 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 SPANXA1Q9NS26 97 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 LINC00588Q9Y4M8 146 aa3.43□□□□□ -1.86
CCDC140-202ENST00000440903 NACAE9PAV3 2078 aa3.42□□□□□ -1.86
CCDC140-202ENST00000440903 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms