RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 DUX3Q96PT4 197 aa11.24□□□□□ -0.61
APP-208ENST00000439274 A0A096LNT2 108 aa11.23□□□□□ -0.61
APP-208ENST00000439274 A8MWV9 139 aa11.23□□□□□ -0.61
APP-208ENST00000439274 UBE2E2Q96LR5 201 aa11.23□□□□□ -0.61
APP-208ENST00000439274 ELANEP08246 267 aa11.23□□□□□ -0.61
APP-208ENST00000439274 ANKRD29Q8N6D5 301 aa11.23□□□□□ -0.61
APP-208ENST00000439274 PPDPFLQ8WWR9 84 aa11.23□□□□□ -0.61
APP-208ENST00000439274 A8MZ25 164 aa11.22□□□□□ -0.61
APP-208ENST00000439274 M0R2P5 195 aa11.22□□□□□ -0.61
APP-208ENST00000439274 SBSPONQ8IVN8 264 aa11.22□□□□□ -0.61
APP-208ENST00000439274 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
APP-208ENST00000439274 TNFRSF18Q9Y5U5 241 aa11.22□□□□□ -0.61
APP-208ENST00000439274 NACAE9PAV3 2078 aa11.22□□□□□ -0.61
APP-208ENST00000439274 CUBNO60494 3623 aa11.22□□□□□ -0.61
APP-208ENST00000439274 RNF152Q8N8N0 203 aa11.22□□□□□ -0.61
APP-208ENST00000439274 ERG28Q9UKR5 140 aa11.22□□□□□ -0.61
APP-208ENST00000439274 H3BMM0 161 aa11.21□□□□□ -0.61
APP-208ENST00000439274 MT-ATP8P03928 68 aa11.21□□□□□ -0.61
APP-208ENST00000439274 DSCR9P59020 149 aa11.21□□□□□ -0.61
APP-208ENST00000439274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
APP-208ENST00000439274 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
APP-208ENST00000439274 C9JAW5 83 aa11.2□□□□□ -0.62
APP-208ENST00000439274 FAM208BQ5VWN6 2430 aa11.2□□□□□ -0.62
APP-208ENST00000439274 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
APP-208ENST00000439274 IGHV3-38A0A0C4DH36 116 aa11.2□□□□□ -0.62
APP-208ENST00000439274 MRPS36P82909 103 aaKnown RBP11.2□□□□□ -0.62
APP-208ENST00000439274 Q1RN00 199 aa11.2□□□□□ -0.62
APP-208ENST00000439274 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
APP-208ENST00000439274 MYO9AB2RTY4 2548 aa11.2□□□□□ -0.62
APP-208ENST00000439274 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
APP-208ENST00000439274 XGP55808 180 aa11.19□□□□□ -0.62
APP-208ENST00000439274 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
APP-208ENST00000439274 LITAFQ99732 161 aa11.19□□□□□ -0.62
APP-208ENST00000439274 SLC25A20O43772 301 aa11.19□□□□□ -0.62
APP-208ENST00000439274 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
APP-208ENST00000439274 Q6YL49 198 aa11.19□□□□□ -0.62
APP-208ENST00000439274 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
APP-208ENST00000439274 CHCHD7Q9BUK0 85 aa11.19□□□□□ -0.62
APP-208ENST00000439274 LRRK2Q5S007 2527 aa11.19□□□□□ -0.62
APP-208ENST00000439274 PRSS2P07478 247 aa11.18□□□□□ -0.62
APP-208ENST00000439274 NPC2P61916 151 aa11.18□□□□□ -0.62
APP-208ENST00000439274 SPINK8P0C7L1 97 aa11.18□□□□□ -0.62
APP-208ENST00000439274 EDA2RQ9HAV5 297 aa11.18□□□□□ -0.62
APP-208ENST00000439274 TEX15Q9BXT5 2789 aa11.18□□□□□ -0.62
APP-208ENST00000439274 J3QLI3 93 aa11.17□□□□□ -0.62
APP-208ENST00000439274 Q6ZUT4 128 aa11.17□□□□□ -0.62
APP-208ENST00000439274 LINC00467Q9BRT7 94 aa11.17□□□□□ -0.62
APP-208ENST00000439274 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
APP-208ENST00000439274 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
APP-208ENST00000439274 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
APP-208ENST00000439274 CRYBA4P53673 196 aa11.16□□□□□ -0.62
APP-208ENST00000439274 NDUFA12Q9UI09 145 aa11.16□□□□□ -0.62
APP-208ENST00000439274 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
APP-208ENST00000439274 KHDC1LQ5JSQ8 128 aa11.16□□□□□ -0.62
APP-208ENST00000439274 Q5PR19 223 aa11.16□□□□□ -0.62
APP-208ENST00000439274 Q6ZSV7 163 aa11.16□□□□□ -0.62
APP-208ENST00000439274 LINC01587Q99440 93 aa11.16□□□□□ -0.62
APP-208ENST00000439274 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
APP-208ENST00000439274 CKS1BP61024 79 aa11.15□□□□□ -0.62
APP-208ENST00000439274 PTPN13Q12923 2485 aa11.15□□□□□ -0.62
APP-208ENST00000439274 ABCA12Q86UK0 2595 aa11.15□□□□□ -0.62
APP-208ENST00000439274 AKAP9Q99996 3911 aa11.15□□□□□ -0.62
APP-208ENST00000439274 A0A1B0GV72 72 aa11.15□□□□□ -0.62
APP-208ENST00000439274 A8MTW9 85 aa11.15□□□□□ -0.62
APP-208ENST00000439274 CIDEAO60543 219 aa11.15□□□□□ -0.62
APP-208ENST00000439274 VSIG2Q96IQ7 327 aa11.15□□□□□ -0.62
APP-208ENST00000439274 MAP6D1Q9H9H5 199 aa11.15□□□□□ -0.62
APP-208ENST00000439274 CHD6Q8TD26 2715 aa11.15□□□□□ -0.62
APP-208ENST00000439274 TRIAP1O43715 76 aa11.14□□□□□ -0.63
APP-208ENST00000439274 FSHBP01225 129 aa11.14□□□□□ -0.63
APP-208ENST00000439274 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
APP-208ENST00000439274 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
APP-208ENST00000439274 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
APP-208ENST00000439274 PLA2G2AP14555 144 aa11.12□□□□□ -0.63
APP-208ENST00000439274 LINC01620Q4KN68 170 aa11.12□□□□□ -0.63
APP-208ENST00000439274 DAND5Q8N907 189 aa11.12□□□□□ -0.63
APP-208ENST00000439274 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
APP-208ENST00000439274 ZNF469Q96JG9 3925 aaPredicted RBP11.12□□□□□ -0.63
APP-208ENST00000439274 TLN2Q9Y4G6 2542 aa11.12□□□□□ -0.63
APP-208ENST00000439274 ATXN8Q156A1 80 aa11.12□□□□□ -0.63
APP-208ENST00000439274 DYNLRB2Q8TF09 96 aa11.12□□□□□ -0.63
APP-208ENST00000439274 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
APP-208ENST00000439274 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
APP-208ENST00000439274 NAV2Q8IVL1 2488 aa11.11□□□□□ -0.63
APP-208ENST00000439274 CR1P17927 2039 aa11.11□□□□□ -0.63
APP-208ENST00000439274 IGHV3-53P01767 116 aa11.11□□□□□ -0.63
APP-208ENST00000439274 MIAQ16674 131 aa11.11□□□□□ -0.63
APP-208ENST00000439274 HIST2H2BCQ6DN03 193 aa11.11□□□□□ -0.63
APP-208ENST00000439274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.11□□□□□ -0.63
APP-208ENST00000439274 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
APP-208ENST00000439274 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
APP-208ENST00000439274 SPANXCQ9NY87 97 aa11.11□□□□□ -0.63
APP-208ENST00000439274 NBPF19A0A087WUL8 3843 aa11.11□□□□□ -0.63
APP-208ENST00000439274 XCL2Q9UBD3 114 aa11.1□□□□□ -0.63
APP-208ENST00000439274 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
APP-208ENST00000439274 TRBV30A0A0K0K1B3 111 aa11.1□□□□□ -0.63
APP-208ENST00000439274 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
APP-208ENST00000439274 ICOSQ9Y6W8 199 aa11.1□□□□□ -0.63
APP-208ENST00000439274 INSP01308 110 aa11.09□□□□□ -0.63
APP-208ENST00000439274 DEFB114Q30KQ6 69 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms