RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ODF1Q14990 250 aa9.21□□□□□ -0.94
TCOF1-205ENST00000439160 TOMM6Q96B49 74 aa9.21□□□□□ -0.94
TCOF1-205ENST00000439160 ZMAT4Q9H898 229 aa9.21□□□□□ -0.94
TCOF1-205ENST00000439160 Q9HAA7 133 aa9.21□□□□□ -0.94
TCOF1-205ENST00000439160 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.94
TCOF1-205ENST00000439160 LAMTOR3Q9UHA4 124 aa9.21□□□□□ -0.94
TCOF1-205ENST00000439160 FXYD2P54710 66 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 MRPL23Q16540 153 aaKnown RBP9.2□□□□□ -0.94
TCOF1-205ENST00000439160 TAL2Q16559 108 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 C12orf74Q32Q52 190 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 CFAP54Q96N23 3096 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 C11orf86A6NJI1 115 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 INSL3P51460 131 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 SMR3AQ99954 134 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 C20orf203Q8NBC4 194 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 C11orf21Q9P2W6 132 aa9.2□□□□□ -0.94
TCOF1-205ENST00000439160 NDUFA11Q86Y39 141 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 PRR9Q5T870 116 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 TIMM17AQ99595 171 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 EDN2P20800 178 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
TCOF1-205ENST00000439160 SPEGQ15772 3267 aa9.18□□□□□ -0.94
TCOF1-205ENST00000439160 F8W1H4 67 aa9.18□□□□□ -0.94
TCOF1-205ENST00000439160 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
TCOF1-205ENST00000439160 LINC00310P59036 64 aa9.18□□□□□ -0.94
TCOF1-205ENST00000439160 TRAV12-1A0A0B4J245 112 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 PRM2P04554 102 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 ICOSQ9Y6W8 199 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-205ENST00000439160 WFDC2Q14508 124 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
TCOF1-205ENST00000439160 PCSK5Q92824 1860 aa9.16□□□□□ -0.94
TCOF1-205ENST00000439160 DAND5Q8N907 189 aa9.16□□□□□ -0.94
TCOF1-205ENST00000439160 VSIG2Q96IQ7 327 aa9.16□□□□□ -0.94
TCOF1-205ENST00000439160 WFDC10AQ9H1F0 79 aa9.16□□□□□ -0.94
TCOF1-205ENST00000439160 MGAQ8IWI9 3026 aa9.16□□□□□ -0.94
TCOF1-205ENST00000439160 BOD1L2Q8IYS8 172 aa9.16□□□□□ -0.94
TCOF1-205ENST00000439160 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
TCOF1-205ENST00000439160 DCANP1Q8TF63 244 aa9.15□□□□□ -0.94
TCOF1-205ENST00000439160 EDA2RQ9HAV5 297 aa9.15□□□□□ -0.94
TCOF1-205ENST00000439160 VPS13AQ96RL7 3174 aa9.15□□□□□ -0.94
TCOF1-205ENST00000439160 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.95
TCOF1-205ENST00000439160 HILS1P60008 231 aa9.15□□□□□ -0.95
TCOF1-205ENST00000439160 RNF185Q96GF1 192 aa9.15□□□□□ -0.95
TCOF1-205ENST00000439160 MYO15AQ9UKN7 3530 aa9.15□□□□□ -0.95
TCOF1-205ENST00000439160 TRAV4A0A0B4J268 109 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 IGLL5B9A064 214 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 PROK1P58294 105 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 C1orf43Q9BWL3 253 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 A4D1N5 150 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 E9PLD3 99 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 CFC1P0CG37 223 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
TCOF1-205ENST00000439160 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 Q6ZUT4 128 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 MRGPRG-AS1Q2M3A8 158 aa9.14□□□□□ -0.95
TCOF1-205ENST00000439160 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-205ENST00000439160 MUSTN1Q8IVN3 82 aa9.13□□□□□ -0.95
TCOF1-205ENST00000439160 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
TCOF1-205ENST00000439160 F8P00451 2351 aa9.13□□□□□ -0.95
TCOF1-205ENST00000439160 GAS8-AS1O95177 125 aa9.13□□□□□ -0.95
TCOF1-205ENST00000439160 OVOL2Q9BRP0 275 aa9.13□□□□□ -0.95
TCOF1-205ENST00000439160 PPDPFLQ8WWR9 84 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 KLK12Q9UKR0 248 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 COX7A2LO14548 114 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 PTPRBP23467 1997 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 KLLNB2CW77 178 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 ZNF292O60281 2723 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 DNAH14Q0VDD8 3507 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 TRAV13-2A0A0B4J235 113 aa9.12□□□□□ -0.95
TCOF1-205ENST00000439160 M0QY20 66 aa9.11□□□□□ -0.95
TCOF1-205ENST00000439160 TNRC6BQ9UPQ9 1833 aaKnown RBP9.11□□□□□ -0.95
TCOF1-205ENST00000439160 TRAV26-1A0A087WT03 109 aa9.11□□□□□ -0.95
TCOF1-205ENST00000439160 PRSS47A8MTI9 375 aa9.11□□□□□ -0.95
TCOF1-205ENST00000439160 HERV-K104P63124 156 aa9.11□□□□□ -0.95
TCOF1-205ENST00000439160 RMI2Q96E14 147 aa9.11□□□□□ -0.95
TCOF1-205ENST00000439160 CCL18P55774 89 aa9.1□□□□□ -0.95
TCOF1-205ENST00000439160 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
TCOF1-205ENST00000439160 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
TCOF1-205ENST00000439160 LINC00467Q9BRT7 94 aa9.1□□□□□ -0.95
TCOF1-205ENST00000439160 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
TCOF1-205ENST00000439160 CAMK2N2Q96S95 79 aa9.09□□□□□ -0.95
TCOF1-205ENST00000439160 NEXN-AS1Q8NBZ9 246 aa9.09□□□□□ -0.95
TCOF1-205ENST00000439160 SND1-IT1Q9HBX3 110 aa9.09□□□□□ -0.95
TCOF1-205ENST00000439160 HIGD1BQ9P298 99 aa9.09□□□□□ -0.95
TCOF1-205ENST00000439160 CRIP2P52943 208 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-205ENST00000439160 HIST1H4AP62805 103 aaKnown RBP9.08□□□□□ -0.96
TCOF1-205ENST00000439160 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms