RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
UBE3D-204ENST00000430071 TRAV8-6A0A0B4J262 113 aa11.38□□□□□ -0.59
UBE3D-204ENST00000430071 A0A087WTM6 91 aa11.37□□□□□ -0.59
UBE3D-204ENST00000430071 SDHAF1A6NFY7 115 aa11.37□□□□□ -0.59
UBE3D-204ENST00000430071 CKS2P33552 79 aa11.37□□□□□ -0.59
UBE3D-204ENST00000430071 MAPKAPK5-AS1Q8N8E1 139 aa11.37□□□□□ -0.59
UBE3D-204ENST00000430071 TRAV9-2A0A087WT02 112 aa11.36□□□□□ -0.59
UBE3D-204ENST00000430071 D6R8Y8 96 aa11.36□□□□□ -0.59
UBE3D-204ENST00000430071 ELOBQ15370 118 aa11.36□□□□□ -0.59
UBE3D-204ENST00000430071 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.36□□□□□ -0.59
UBE3D-204ENST00000430071 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
UBE3D-204ENST00000430071 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
UBE3D-204ENST00000430071 TGIF2-C20orf24A0A0A6YYL0 155 aa11.35□□□□□ -0.59
UBE3D-204ENST00000430071 POLR2KP53803 58 aaKnown RBP11.35□□□□□ -0.59
UBE3D-204ENST00000430071 NPYP01303 97 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 IGHV3-30P01768 117 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 IGHV3-33P01772 117 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 PPBPP02775 128 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 IGHV3-30-3P0DP02 117 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 IGHV3-30-5P0DP03 117 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 CBLN2Q8IUK8 224 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 YPEL4Q96NS1 127 aa11.34□□□□□ -0.59
UBE3D-204ENST00000430071 TRBV24-1A0A075B6N3 115 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 PPP1R17O96001 155 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 COTL1Q14019 142 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 IQCJQ1A5X6 159 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 LINC01556Q5JQF7 62 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 ORMDL3Q8N138 153 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 GNB1LQ9BYB4 327 aa11.33□□□□□ -0.6
UBE3D-204ENST00000430071 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
UBE3D-204ENST00000430071 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
UBE3D-204ENST00000430071 PMCHP20382 165 aa11.32□□□□□ -0.6
UBE3D-204ENST00000430071 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
UBE3D-204ENST00000430071 NIT1Q86X76 327 aa11.32□□□□□ -0.6
UBE3D-204ENST00000430071 PRELID3AQ96N28 172 aa11.32□□□□□ -0.6
UBE3D-204ENST00000430071 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 I3L3M4 83 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 TSHBP01222 138 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 HLA-DQA1P01909 254 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 CHCHD5Q9BSY4 110 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 Q9HAA7 133 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 SMCO4Q9NRQ5 59 aa11.31□□□□□ -0.6
UBE3D-204ENST00000430071 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
UBE3D-204ENST00000430071 K7EP13 123 aa11.3□□□□□ -0.6
UBE3D-204ENST00000430071 PHOX2AO14813 284 aa11.3□□□□□ -0.6
UBE3D-204ENST00000430071 APCSP02743 223 aa11.3□□□□□ -0.6
UBE3D-204ENST00000430071 AMTP48728 403 aa11.3□□□□□ -0.6
UBE3D-204ENST00000430071 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
UBE3D-204ENST00000430071 VCYO14598 125 aa11.29□□□□□ -0.6
UBE3D-204ENST00000430071 KIAA1644Q3SXP7 199 aa11.29□□□□□ -0.6
UBE3D-204ENST00000430071 COX19Q49B96 90 aa11.29□□□□□ -0.6
UBE3D-204ENST00000430071 Q8N1X5 172 aa11.29□□□□□ -0.6
UBE3D-204ENST00000430071 C10orf126Q8N4M7 172 aa11.29□□□□□ -0.6
UBE3D-204ENST00000430071 TMEM243Q9BU79 118 aa11.29□□□□□ -0.6
UBE3D-204ENST00000430071 EREGO14944 169 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 MT-ND6P03923 174 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 XGP55808 180 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
UBE3D-204ENST00000430071 GAGE6Q13070 117 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 CHCHD7Q9BUK0 85 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
UBE3D-204ENST00000430071 LAMTOR2Q9Y2Q5 125 aa11.28□□□□□ -0.6
UBE3D-204ENST00000430071 A0A087WX48 190 aa11.27□□□□□ -0.61
UBE3D-204ENST00000430071 WFDC2Q14508 124 aa11.27□□□□□ -0.61
UBE3D-204ENST00000430071 Q8N976 141 aa11.27□□□□□ -0.61
UBE3D-204ENST00000430071 ESDP10768 282 aa11.26□□□□□ -0.61
UBE3D-204ENST00000430071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
UBE3D-204ENST00000430071 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
UBE3D-204ENST00000430071 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 PSCAO43653 123 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 SCO1O75880 301 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 FCER1GP30273 86 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 RBX1P62877 108 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 HAMPP81172 84 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 FABP9Q0Z7S8 132 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 CDPF1Q6NVV7 123 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 KIR2DL4Q99706 377 aa11.25□□□□□ -0.61
UBE3D-204ENST00000430071 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
UBE3D-204ENST00000430071 FAT1Q14517 4588 aa11.24□□□□□ -0.61
UBE3D-204ENST00000430071 PKIAP61925 76 aa11.24□□□□□ -0.61
UBE3D-204ENST00000430071 MAP1LC3AQ9H492 121 aa11.24□□□□□ -0.61
UBE3D-204ENST00000430071 KLK12Q9UKR0 248 aa11.24□□□□□ -0.61
UBE3D-204ENST00000430071 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
UBE3D-204ENST00000430071 UBE2L6O14933 153 aa11.23□□□□□ -0.61
UBE3D-204ENST00000430071 TCAPO15273 167 aa11.23□□□□□ -0.61
UBE3D-204ENST00000430071 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
UBE3D-204ENST00000430071 IGLV4-60A0A075B6I1 120 aa11.22□□□□□ -0.61
UBE3D-204ENST00000430071 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
UBE3D-204ENST00000430071 LECT2O14960 151 aa11.21□□□□□ -0.61
UBE3D-204ENST00000430071 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms