RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 PRM2P04554 102 aa8.38□□□□□ -1.07
LINC01238-203ENST00000429456 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
LINC01238-203ENST00000429456 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
LINC01238-203ENST00000429456 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 CEMP1Q6PRD7 247 aaPredicted RBP8.37□□□□□ -1.07
LINC01238-203ENST00000429456 Q6ZSN1 163 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 LITAFQ99732 161 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 CHCHD7Q9BUK0 85 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 CELSR2Q9HCU4 2923 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 M0QXV9 152 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 IGHV4-31P0DP07 118 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
LINC01238-203ENST00000429456 Q9UF83 564 aa8.37□□□□□ -1.07
LINC01238-203ENST00000429456 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
LINC01238-203ENST00000429456 PRRC2AP48634 2157 aaKnown RBP8.36□□□□□ -1.07
LINC01238-203ENST00000429456 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 FHL3Q13643 280 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 Q8N2B8 174 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 LINC00467Q9BRT7 94 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 UBE2D4Q9Y2X8 147 aa8.36□□□□□ -1.07
LINC01238-203ENST00000429456 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 PEMTQ9UBM1 199 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 CR1P17927 2039 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 CFAP46Q8IYW2 2715 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 ADARB2-AS1A8MUL3 147 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
LINC01238-203ENST00000429456 ANKRD29Q8N6D5 301 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 MAP6D1Q9H9H5 199 aa8.35□□□□□ -1.07
LINC01238-203ENST00000429456 MAP1AP78559 2803 aaPredicted RBP8.34□□□□□ -1.07
LINC01238-203ENST00000429456 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
LINC01238-203ENST00000429456 H7C2G1 150 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 SLC25A20O43772 301 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 IGHV3-53P01767 116 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 BEAN1Q3B7T3 259 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 C4orf3Q8WVX3 66 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 VSIG2Q96IQ7 327 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 LINC01587Q99440 93 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 SPANXCQ9NY87 97 aa8.34□□□□□ -1.08
LINC01238-203ENST00000429456 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.33□□□□□ -1.08
LINC01238-203ENST00000429456 IGKV2-29A2NJV5 120 aaPredicted RBP8.33□□□□□ -1.08
LINC01238-203ENST00000429456 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
LINC01238-203ENST00000429456 CREBBPQ92793 2442 aa8.33□□□□□ -1.08
LINC01238-203ENST00000429456 USP9YO00507 2555 aaPredicted RBP8.32□□□□□ -1.08
LINC01238-203ENST00000429456 TRBV30A0A0K0K1B3 111 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 C9JAW5 83 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 RS1O15537 224 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 Q6ZUT4 128 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 FLNCQ14315 2725 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 WIPF1O43516 503 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 Q1RN00 199 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 DEFB114Q30KQ6 69 aa8.32□□□□□ -1.08
LINC01238-203ENST00000429456 ANKRD17O75179 2603 aaKnown RBP8.32□□□□□ -1.08
LINC01238-203ENST00000429456 ACACBO00763 2458 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 INSP01308 110 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 MT-ATP8P03928 68 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 ATXN8Q156A1 80 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 MIAQ16674 131 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 DYNLRB2Q8TF09 96 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 A8MZ25 164 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 XGP55808 180 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 ZFAND6Q6FIF0 208 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 CSMD2Q7Z408 3487 aa8.31□□□□□ -1.08
LINC01238-203ENST00000429456 TRIAP1O43715 76 aa8.3□□□□□ -1.08
LINC01238-203ENST00000429456 PRSS2P07478 247 aa8.3□□□□□ -1.08
LINC01238-203ENST00000429456 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
LINC01238-203ENST00000429456 IGLV5-45A0A087WSX0 123 aa8.29□□□□□ -1.08
LINC01238-203ENST00000429456 TIRAPP58753 221 aa8.29□□□□□ -1.08
LINC01238-203ENST00000429456 RNF183Q96D59 192 aa8.29□□□□□ -1.08
LINC01238-203ENST00000429456 TIMM17BO60830 172 aa8.29□□□□□ -1.08
LINC01238-203ENST00000429456 KHDC1LQ5JSQ8 128 aa8.29□□□□□ -1.08
LINC01238-203ENST00000429456 IGSF10Q6WRI0 2623 aa8.29□□□□□ -1.08
LINC01238-203ENST00000429456 CDKN2A-AS1Q9UH64 79 aa8.28□□□□□ -1.08
LINC01238-203ENST00000429456 ICOSQ9Y6W8 199 aa8.28□□□□□ -1.08
LINC01238-203ENST00000429456 ZANQ9Y493 2812 aa8.28□□□□□ -1.08
LINC01238-203ENST00000429456 TMEM262E9PQX1 116 aa8.28□□□□□ -1.08
LINC01238-203ENST00000429456 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
LINC01238-203ENST00000429456 TRBV10-2A0A0K0K1G8 114 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 ODF3L2Q3SX64 289 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 HIST2H2BDQ6DRA6 164 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 IL17DQ8TAD2 202 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 FBN2P35556 2912 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 NDUFA1O15239 70 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 IFITM1P13164 125 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 DEFB113Q30KQ7 82 aa8.27□□□□□ -1.09
LINC01238-203ENST00000429456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
LINC01238-203ENST00000429456 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms