RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 INSP01308 110 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 MGPP08493 103 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 CFC1BP0CG36 223 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 CFC1P0CG37 223 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 BAHCC1Q9P281 2608 aa6.25□□□□□ -1.41
SH3D19-204ENST00000427414 IGKV3-7A0A075B6H7 116 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 KRTAP10-3P60369 221 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 HERVK_113P61574 105 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 ODF3L2Q3SX64 289 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 SBSPONQ8IVN8 264 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 C10orf126Q8N4M7 172 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 PF4P02776 101 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 STHQ8IWL8 128 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 DEFB104AQ8WTQ1 72 aa6.24□□□□□ -1.41
SH3D19-204ENST00000427414 SLC25A20O43772 301 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 ZNF415Q09FC8 603 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 C19orf73Q9NVV2 129 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 C9JAW5 83 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 SNCGO76070 127 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 CRYGDP07320 174 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 GAGE2BQ13066 116 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 GAGE2EQ4V326 116 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 DUX3Q96PT4 197 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 GAGE2DQ9UEU5 116 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 KIF25-AS1Q9Y6Z4 181 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 ABCA12Q86UK0 2595 aa6.23□□□□□ -1.41
SH3D19-204ENST00000427414 TRAV12-3A0A0B4J271 114 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 A0A1W2PRX2 142 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 TEX15Q9BXT5 2789 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 H7C2G1 150 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
SH3D19-204ENST00000427414 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 PAPPA-AS1Q5QFB9 102 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 AKAP9Q99996 3911 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 POLQO75417 2590 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 IGLV4-69A0A075B6H9 119 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 RBMY1BA6NDE4 496 aaKnown RBP6.22□□□□□ -1.41
SH3D19-204ENST00000427414 RBMY1EA6NEQ0 496 aaKnown RBP6.22□□□□□ -1.41
SH3D19-204ENST00000427414 RHODO00212 210 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 RBMY1DP0C7P1 496 aaKnown RBP6.22□□□□□ -1.41
SH3D19-204ENST00000427414 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 NSUN5P1Q3KNT7 163 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.22□□□□□ -1.41
SH3D19-204ENST00000427414 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 TNFRSF18Q9Y5U5 241 aa6.22□□□□□ -1.41
SH3D19-204ENST00000427414 ASH1LQ9NR48 2969 aaKnown RBP6.21□□□□□ -1.42
SH3D19-204ENST00000427414 ANK3Q12955 4377 aaKnown RBP6.21□□□□□ -1.42
SH3D19-204ENST00000427414 VPS13CQ709C8 3753 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 TRAV4A0A0B4J268 109 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 KNCNA6PVL3 124 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 M0R2P5 195 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 GNRH2O43555 120 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 TTC32Q5I0X7 151 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 Q8N1Y9 231 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 IL17DQ8TAD2 202 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 TSHBP01222 138 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
SH3D19-204ENST00000427414 PMVKQ15126 192 aa6.21□□□□□ -1.42
SH3D19-204ENST00000427414 GAGE12JA6NER3 117 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 GAGE7O76087 117 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 GAGE12FP0CL80 117 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 GAGE12GP0CL81 117 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 GAGE12IP0CL82 117 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 LINC00315P59091 139 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 GAGE4Q13068 117 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 KIR2DL5BQ8NHK3 375 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 NTN5Q8WTR8 489 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-204ENST00000427414 SMIM9A6NGZ8 99 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 J3QQQ9 107 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
SH3D19-204ENST00000427414 DEFB1P60022 68 aa6.2□□□□□ -1.42
SH3D19-204ENST00000427414 RPL39P62891 51 aaKnown RBP6.2□□□□□ -1.42
SH3D19-204ENST00000427414 FLNAP21333 2647 aaKnown RBP6.2□□□□□ -1.42
SH3D19-204ENST00000427414 CENPEQ02224 2701 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 HECTD1Q9ULT8 2610 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 IGIPA6NJ69 53 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 CCDC179H3BU77 68 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 IFITM1P13164 125 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 Q1RN00 199 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 C11orf44Q8N8P7 122 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 DNAJC30Q96LL9 226 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 IGHV3-33P01772 117 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 HERV-K104P63124 156 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 DAZ2Q13117 558 aaKnown RBP6.19□□□□□ -1.42
SH3D19-204ENST00000427414 C11orf72Q8NBR9 251 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 ZNRF2Q8NHG8 242 aa6.19□□□□□ -1.42
SH3D19-204ENST00000427414 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
SH3D19-204ENST00000427414 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
SH3D19-204ENST00000427414 CSMD2Q7Z408 3487 aa6.18□□□□□ -1.42
SH3D19-204ENST00000427414 TMEM141Q96I45 108 aa6.18□□□□□ -1.42
SH3D19-204ENST00000427414 OVOL2Q9BRP0 275 aa6.18□□□□□ -1.42
SH3D19-204ENST00000427414 CELSR1Q9NYQ6 3014 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms