RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 UBE2D3P61077 147 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 UBE2D2P62837 147 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 C1orf158Q8N1D5 194 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 LINC01587Q99440 93 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 CHCHD7Q9BUK0 85 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
CKS1BP6-201ENST00000424932 TLN2Q9Y4G6 2542 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 SVEP1Q4LDE5 3571 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 CHD6Q8TD26 2715 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 TRAV4A0A0B4J268 109 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 A0A0B4J2C4 111 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 A0A0J9YXV3 536 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 TMEM238C9JI98 176 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 G3V4G9 280 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 IGLV1-51P01701 117 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 EMP1P54849 157 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 PROK1P58294 105 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 HILS1P60008 231 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 DAZ2Q13117 558 aaKnown RBP3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 SRSF9Q13242 221 aaKnown RBP eCLIP3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 COTL1Q14019 142 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 Q6ZSN1 163 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 NDUFA11Q86Y39 141 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 STHQ8IWL8 128 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 C10orf126Q8N4M7 172 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 LINC01006Q8NI28 216 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 RNF183Q96D59 192 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 OPRPNQ99935 248 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 CITED2Q99967 270 aaPredicted RBP3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 MRPL16Q9NX20 251 aaKnown RBP3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 PGPEP1Q9NXJ5 209 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 PRO0461Q9UI25 63 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 CSDC2Q9Y534 153 aaKnown RBP3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
CKS1BP6-201ENST00000424932 TRBV20-1A0A075B6N2 111 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 IGHV1-58A0A0C4DH39 117 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 ADARB2-AS1A8MUL3 147 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 J3QKU1 62 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 K7EQD1 137 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 TIMM17BO60830 172 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 TSPAN13O95857 204 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 IGHV3-30-3P0DP02 117 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 PLA2G2AP14555 144 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 HTN1P15515 57 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 TIRAPP58753 221 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 SMAGPQ0VAQ4 97 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 Q6ZUT4 128 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 SBSPONQ8IVN8 264 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 ATP6V0E2Q8NHE4 81 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 ZNF418Q8TF45 676 aaPredicted RBP3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 C16orf74Q96GX8 76 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 VSIG2Q96IQ7 327 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 LITAFQ99732 161 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 C1QTNF4Q9BXJ3 329 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 C19orf73Q9NVV2 129 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 XCL2Q9UBD3 114 aa3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 SETXQ7Z333 2677 aaKnown RBP3.48□□□□□ -1.85
CKS1BP6-201ENST00000424932 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 IGHV3-73A0A0B4J1V6 119 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 IGLV5-39A0A0G2JS06 123 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 A0A0J9YXY3 114 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 TEX48A0A1B0GUV7 120 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 PLAC8L1A1L4L8 177 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 H7C423 109 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 J3QR89 54 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 M0QXV9 152 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 SAP30O75446 220 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 GIG44P09565 113 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 CFC1BP0CG36 223 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 CFC1P0CG37 223 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 AZU1P20160 251 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 RPL24P83731 157 aaKnown RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 RPL36AP83881 106 aaKnown RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 RNF151Q2KHN1 245 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 GAGE13Q4V321 117 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 ZFAND6Q6FIF0 208 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 DAZ4Q86SG3 579 aaKnown RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 DEFB104AQ8WTQ1 72 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 RPL36ALQ969Q0 106 aaKnown RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 LINC01600Q96MT4 127 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 VPS25Q9BRG1 176 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 OVOL2Q9BRP0 275 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 GTSF1LQ9H1H1 148 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 DAZ3Q9NR90 486 aaKnown RBP3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 YAE1D1Q9NRH1 226 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 Q9UF83 564 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 PRO1854Q9UHT4 67 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 WNK1Q9H4A3 2382 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 CSMD2Q7Z408 3487 aa3.47□□□□□ -1.85
CKS1BP6-201ENST00000424932 SONP18583 2426 aaKnown RBP3.46□□□□□ -1.85
CKS1BP6-201ENST00000424932 TRGV1A0A0A0MS02 117 aa3.46□□□□□ -1.86
CKS1BP6-201ENST00000424932 TRBV6-4A0A1B0GX49 114 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms