RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 HMGN2P05204 90 aaKnown RBP2.06□□□□□ -2.08
SF3B1-205ENST00000424674 Q86TA4 180 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 FAM223AQ8IWN6 122 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 TCHHQ07283 1943 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 MYO9BQ13459 2157 aa2.06□□□□□ -2.08
SF3B1-205ENST00000424674 FREM3P0C091 2139 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 PRR14LQ5THK1 2151 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 TRBV6-7A0A0A0MS04 114 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 LOC101927531A0A1B0GV80 90 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 PDE6GP18545 87 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 PSMG4Q5JS54 123 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 AMELXQ99217 191 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 NDUFA4L2Q9NRX3 87 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 TMEM14BQ9NUH8 114 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 EFCAB5A4FU69 1503 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 PPRC1Q5VV67 1664 aaKnown RBP2.05□□□□□ -2.08
SF3B1-205ENST00000424674 PLXNA1Q9UIW2 1896 aa2.05□□□□□ -2.08
SF3B1-205ENST00000424674 A0A087WXM4 84 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 IGLV3-32A0A0A0MS00 114 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 PCNX2A6NKB5 2137 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 JMJD7-PLA2G4BH0Y9G9 81 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 HMGN4O00479 90 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 PPYP01298 95 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 SAA2P0DJI9 122 aaPredicted RBP2.04□□□□□ -2.08
SF3B1-205ENST00000424674 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 DEFB121Q5J5C9 76 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 FAM74A4Q5TZK3 123 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 KNDC1Q76NI1 1749 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 C20orf197Q8N268 126 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
SF3B1-205ENST00000424674 IQGAP3Q86VI3 1631 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 DIP2CQ9Y2E4 1556 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 MYMXA0A1B0GTQ4 84 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 F8WEM9 126 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 PPP1R17O96001 155 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 SPAG11BQ08648 103 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 C10orf55Q5SWW7 151 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 SPAG11AQ6PDA7 123 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 SFTA2Q6UW10 78 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 ARHGAP32A7KAX9 2087 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 CASP8AP2Q9UKL3 1982 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 MYH4Q9Y623 1939 aa2.03□□□□□ -2.08
SF3B1-205ENST00000424674 LTBP2Q14767 1821 aa2.03□□□□□ -2.09
SF3B1-205ENST00000424674 ZNF142P52746 1687 aaPredicted RBP2.02□□□□□ -2.09
SF3B1-205ENST00000424674 ADAMTS7Q9UKP4 1686 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 LRRC37A3O60309 1634 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 CDK13Q14004 1512 aaKnown RBP2.02□□□□□ -2.09
SF3B1-205ENST00000424674 A0A1B0GWA3 101 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 CLPSL1A2RUU4 121 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 LRCOL1A6NCL2 159 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 IGLV3-1P01715 115 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 SPACA4Q8TDM5 124 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 COX7B2Q8TF08 81 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 R4GMQ9 66 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 MYO5CQ9NQX4 1742 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 COL4A5P29400 1685 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 COL4A6Q14031 1691 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 TOP2BQ02880 1626 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 SNRNP200O75643 2136 aaKnown RBP2.02□□□□□ -2.09
SF3B1-205ENST00000424674 HEATR5BQ9P2D3 2071 aa2.02□□□□□ -2.09
SF3B1-205ENST00000424674 RGPD8O14715 1765 aaPredicted RBP2.01□□□□□ -2.09
SF3B1-205ENST00000424674 RGPD5Q99666 1765 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 IGKV2-24A0A0C4DH68 120 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 A0A1W2PNN7 141 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 CEBPZOSA8MTT3 80 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 IQCF6A8MYZ5 107 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 H3BRN7 92 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 DNAL4O96015 105 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 CCL3L1P16619 93 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 PLGLAQ15195 96 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 C6orf201Q7Z4U5 140 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 DEFB132Q7Z7B7 95 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 TMEM14CQ9P0S9 112 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 ARL2-SNX15V9GYD0 113 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 KIF21AQ7Z4S6 1674 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 NEXMIFQ5QGS0 1516 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 DOCK2Q92608 1830 aa2.01□□□□□ -2.09
SF3B1-205ENST00000424674 KRTAP13-2Q52LG2 175 aa2□□□□□ -2.09
SF3B1-205ENST00000424674 PRR9Q5T870 116 aa2□□□□□ -2.09
SF3B1-205ENST00000424674 ATRXP46100 2492 aa2□□□□□ -2.09
SF3B1-205ENST00000424674 KIAA2026Q5HYC2 2103 aa2□□□□□ -2.09
SF3B1-205ENST00000424674 MYO18AQ92614 2054 aaKnown RBP2□□□□□ -2.09
SF3B1-205ENST00000424674 STRCP1A6NGW2 1772 aa2□□□□□ -2.09
SF3B1-205ENST00000424674 PREX2Q70Z35 1606 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 MADDQ8WXG6 1647 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 NINQ8N4C6 2090 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 FAM223BA6NKX1 122 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 LEPROTL1O95214 131 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 SFTA3P0C7M3 94 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 ARMS2P0C7Q2 107 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 RNASE3P12724 160 aaKnown RBP1.99□□□□□ -2.09
SF3B1-205ENST00000424674 LINC00315P59091 139 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 SMIM5Q71RC9 77 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 CYYR1Q96J86 154 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 PSENENQ9NZ42 101 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 V9GYV3 84 aa1.99□□□□□ -2.09
SF3B1-205ENST00000424674 HMGXB3Q12766 1538 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms