RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 Q6ZSN1 163 aa11.56□□□□□ -0.56
CDH1-202ENST00000422392 UBE2E2Q96LR5 201 aa11.56□□□□□ -0.56
CDH1-202ENST00000422392 TRAV8-3A0A0A6YYJ7 113 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 SCGB1C2P0DMR2 95 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 CD28P10747 220 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 PRO1854Q9UHT4 67 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 ELANEP08246 267 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 DSCR9P59020 149 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
CDH1-202ENST00000422392 PRB1P04280 392 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 FHL3Q13643 280 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 Q6YL49 198 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 TMEM61Q8N0U2 210 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 A8MZ25 164 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 H3BMM0 161 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 KHDC1LQ5JSQ8 128 aa11.53□□□□□ -0.56
CDH1-202ENST00000422392 USP24Q9UPU5 2620 aa11.52□□□□□ -0.56
CDH1-202ENST00000422392 IGHV3-38A0A0C4DH36 116 aa11.52□□□□□ -0.56
CDH1-202ENST00000422392 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.56
CDH1-202ENST00000422392 CARD19Q96LW7 228 aa11.52□□□□□ -0.57
CDH1-202ENST00000422392 TNFRSF18Q9Y5U5 241 aa11.52□□□□□ -0.57
CDH1-202ENST00000422392 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.51□□□□□ -0.57
CDH1-202ENST00000422392 A0A0J9YXY3 114 aa11.51□□□□□ -0.57
CDH1-202ENST00000422392 IGKV2-29A2NJV5 120 aaPredicted RBP11.51□□□□□ -0.57
CDH1-202ENST00000422392 TMEM263Q8WUH6 116 aaKnown RBP11.51□□□□□ -0.57
CDH1-202ENST00000422392 APCP25054 2843 aa11.51□□□□□ -0.57
CDH1-202ENST00000422392 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 J3QLI3 93 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 TIMM21Q9BVV7 248 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 JMJD1CQ15652 2540 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 UBR5O95071 2799 aaPredicted RBP11.5□□□□□ -0.57
CDH1-202ENST00000422392 IGHV3-33P01772 117 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 KRTAP10-9P60411 292 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 CDIP1Q9H305 208 aa11.5□□□□□ -0.57
CDH1-202ENST00000422392 NPC2P61916 151 aa11.49□□□□□ -0.57
CDH1-202ENST00000422392 RNF152Q8N8N0 203 aa11.49□□□□□ -0.57
CDH1-202ENST00000422392 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
CDH1-202ENST00000422392 M0R2P5 195 aa11.49□□□□□ -0.57
CDH1-202ENST00000422392 IGHV4-31P0DP07 118 aa11.49□□□□□ -0.57
CDH1-202ENST00000422392 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 MRPS36P82909 103 aaKnown RBP11.48□□□□□ -0.57
CDH1-202ENST00000422392 TEN1Q86WV5 123 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 FSHBP01225 129 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 PRSS2P07478 247 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 Q1RN00 199 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 ANKRD29Q8N6D5 301 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 LINC01587Q99440 93 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 PYGO1Q9Y3Y4 419 aa11.48□□□□□ -0.57
CDH1-202ENST00000422392 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 A8MWV9 139 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 ADAMTSL4-AS1Q5T5F5 129 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 MAP6D1Q9H9H5 199 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 ERG28Q9UKR5 140 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 C9JAW5 83 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 Q6ZUT4 128 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 LINC00467Q9BRT7 94 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 ITPR3Q14573 2671 aa11.47□□□□□ -0.57
CDH1-202ENST00000422392 SETXQ7Z333 2677 aaKnown RBP11.47□□□□□ -0.57
CDH1-202ENST00000422392 Q6ZSV7 163 aa11.46□□□□□ -0.57
CDH1-202ENST00000422392 LITAFQ99732 161 aa11.46□□□□□ -0.57
CDH1-202ENST00000422392 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
CDH1-202ENST00000422392 ZNF415Q09FC8 603 aa11.46□□□□□ -0.58
CDH1-202ENST00000422392 PPDPFLQ8WWR9 84 aa11.46□□□□□ -0.58
CDH1-202ENST00000422392 SCGB1A1P11684 91 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 Q5PR19 223 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 EDA2RQ9HAV5 297 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 A0A0B4J2C4 111 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 SLC25A20O43772 301 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 MT-ATP8P03928 68 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
CDH1-202ENST00000422392 IGHV3OR16-12A0A075B7B8 117 aa11.44□□□□□ -0.58
CDH1-202ENST00000422392 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
CDH1-202ENST00000422392 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
CDH1-202ENST00000422392 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
CDH1-202ENST00000422392 XCL2Q9UBD3 114 aa11.44□□□□□ -0.58
CDH1-202ENST00000422392 A8MTW9 85 aa11.44□□□□□ -0.58
CDH1-202ENST00000422392 XGP55808 180 aa11.43□□□□□ -0.58
CDH1-202ENST00000422392 DAND5Q8N907 189 aa11.43□□□□□ -0.58
CDH1-202ENST00000422392 VSIG2Q96IQ7 327 aa11.42□□□□□ -0.58
CDH1-202ENST00000422392 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
CDH1-202ENST00000422392 FLNAP21333 2647 aaKnown RBP11.42□□□□□ -0.58
CDH1-202ENST00000422392 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
CDH1-202ENST00000422392 TRIAP1O43715 76 aa11.41□□□□□ -0.58
CDH1-202ENST00000422392 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
CDH1-202ENST00000422392 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.41□□□□□ -0.58
CDH1-202ENST00000422392 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
CDH1-202ENST00000422392 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
CDH1-202ENST00000422392 IGHV3-53P01767 116 aa11.41□□□□□ -0.58
CDH1-202ENST00000422392 C4orf3Q8WVX3 66 aa11.4□□□□□ -0.58
CDH1-202ENST00000422392 BBC3Q96PG8 261 aaPredicted RBP11.4□□□□□ -0.58
CDH1-202ENST00000422392 GEMIN7Q9H840 131 aaKnown RBP11.4□□□□□ -0.58
CDH1-202ENST00000422392 SPANXA1Q9NS26 97 aa11.4□□□□□ -0.58
CDH1-202ENST00000422392 A0A1W2PRX2 142 aa11.39□□□□□ -0.59
CDH1-202ENST00000422392 INSP01308 110 aa11.39□□□□□ -0.59
CDH1-202ENST00000422392 NDUFA7O95182 113 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms