RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 CNFNQ9BYD5 112 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
HDAC8-212ENST00000421523 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 TRBV25-1A0A075B6N4 114 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 TRAV8-4A0A0B4J246 113 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 A0A1B0GV50 99 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 F5H697 171 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 BCL2L11O43521 198 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 P01737 135 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 GZMBP10144 247 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 REG3AQ06141 175 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 GAGE6Q13070 117 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 RGS21Q2M5E4 152 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 SUMO4Q6EEV6 95 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 CLPSL2Q6UWE3 100 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 C9orf62Q8N4C0 152 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 SMIM12Q96EX1 92 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 PGLYRP4Q96LB8 373 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
HDAC8-212ENST00000421523 MRPL18Q9H0U6 180 aaKnown RBP3.51□□□□□ -1.85
HDAC8-212ENST00000421523 IGLV10-54A0A075B6I4 117 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 A0A087WYN8 130 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 IGHV1-24A0A0C4DH33 117 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 PFDN1O60925 122 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 LINC01547P58512 204 aaPredicted RBP3.5□□□□□ -1.85
HDAC8-212ENST00000421523 SSTP61278 116 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 CACNG7P62955 275 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 FER1L6-AS1Q8NA97 138 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 SPACA4Q8TDM5 124 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 MANBALQ9NQG1 85 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 NIT2Q9NQR4 276 aa3.5□□□□□ -1.85
HDAC8-212ENST00000421523 TRAV26-2A0A0B4J265 109 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 RAB19A4D1S5 217 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 F2Z2F3 143 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 CHTF8P0CG12 524 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 SMIM17P0DL12 118 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 NTF3P20783 257 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 CTRLP40313 264 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 NKX2-5P52952 324 aaPredicted RBP3.49□□□□□ -1.85
HDAC8-212ENST00000421523 RPS20P60866 119 aaKnown RBP3.49□□□□□ -1.85
HDAC8-212ENST00000421523 PRR3P79522 188 aaKnown RBP3.49□□□□□ -1.85
HDAC8-212ENST00000421523 CENPWQ5EE01 88 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 RASL11AQ6T310 242 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 LYZL1Q6UWQ5 148 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 C15orf56Q8N910 161 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.49□□□□□ -1.85
HDAC8-212ENST00000421523 OR2D3Q8NGH3 330 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 DPH3Q96FX2 82 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 RNF185Q96GF1 192 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 PLAC8Q9NZF1 115 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 GNG13Q9P2W3 67 aa3.49□□□□□ -1.85
HDAC8-212ENST00000421523 IGHV3-64A0A075B6Q5 118 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 KANTRA0A1W2PQU2 76 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 hDV102S1A0JD36 115 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 H7C1H1 209 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 GHRHP01286 108 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 MGPP08493 103 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 SULT1A2P50226 295 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 RAB5CP51148 216 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 MEF2BQ02080 365 aaPredicted RBP3.48□□□□□ -1.85
HDAC8-212ENST00000421523 GATD1Q8NB37 220 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 NUDT10Q8NFP7 164 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 C7orf33Q8WU49 177 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 NUDT11Q96G61 164 aa3.48□□□□□ -1.85
HDAC8-212ENST00000421523 FAM231BA6NCW3 169 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 K7EN84 100 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 PDE6DO43924 150 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 TRGC1P0CF51 173 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 GNG4P50150 75 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 FOXA3P55318 350 aaPredicted RBP3.47□□□□□ -1.85
HDAC8-212ENST00000421523 EIF5AP63241 154 aaKnown RBP3.47□□□□□ -1.85
HDAC8-212ENST00000421523 Q6ZNX1 250 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 PRSS3P2Q8NHM4 247 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 OCC1Q8TAD7 63 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 GTSF1Q8WW33 167 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 TPPP3Q9BW30 176 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
HDAC8-212ENST00000421523 GVQW2A0A096LPI5 108 aaPredicted RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 XKRY2A2RUG3 117 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 GAGE12HA6NDE8 117 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 H7C423 109 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 NDUFS6O75380 124 aaKnown RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 NCR2O95944 276 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 IFNA1P01562 189 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 BCL2P10415 239 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 ESDP10768 282 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 RPS10P46783 165 aaKnown RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 COX6A2Q02221 97 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 FOXI1Q12951 378 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 SRSF9Q13242 221 aaKnown RBP eCLIP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 COTL1Q14019 142 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 SPINK6Q6UWN8 80 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 LYPD6BQ8NI32 183 aa3.46□□□□□ -1.86
HDAC8-212ENST00000421523 CHCHD10Q8WYQ3 142 aaPredicted RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 RNASE7Q9H1E1 156 aaKnown RBP3.46□□□□□ -1.86
HDAC8-212ENST00000421523 MED9Q9NWA0 146 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms