RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 H7C423 109 aa8.04□□□□□ -1.12
PTCH1-206ENST00000421141 PRUNE2Q8WUY3 3088 aa8.04□□□□□ -1.12
PTCH1-206ENST00000421141 ZNF747Q9BV97 191 aa8.04□□□□□ -1.12
PTCH1-206ENST00000421141 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
PTCH1-206ENST00000421141 SPAG11BQ08648 103 aa8.04□□□□□ -1.12
PTCH1-206ENST00000421141 IGHV4-30-4P0DP06 118 aa8.04□□□□□ -1.12
PTCH1-206ENST00000421141 GATA1P15976 413 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-206ENST00000421141 CCL25O15444 150 aa8.03□□□□□ -1.12
PTCH1-206ENST00000421141 A0A1B0GV90 55 aa8.03□□□□□ -1.12
PTCH1-206ENST00000421141 TP53TG3Q9ULZ0 132 aa8.03□□□□□ -1.12
PTCH1-206ENST00000421141 A0A0J9YWU9 116 aa8.03□□□□□ -1.12
PTCH1-206ENST00000421141 GTSF1Q8WW33 167 aa8.03□□□□□ -1.12
PTCH1-206ENST00000421141 MSRB1Q9NZV6 116 aa8.02□□□□□ -1.13
PTCH1-206ENST00000421141 BVES-AS1Q5T3Y7 98 aa8.02□□□□□ -1.13
PTCH1-206ENST00000421141 KIR3DS1Q14943 382 aa8.02□□□□□ -1.13
PTCH1-206ENST00000421141 PRB2P02812 416 aaPredicted RBP8.02□□□□□ -1.13
PTCH1-206ENST00000421141 GDF5OSQ5U4N7 250 aa8.02□□□□□ -1.13
PTCH1-206ENST00000421141 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
PTCH1-206ENST00000421141 LINC01545Q5VT33 79 aa8.01□□□□□ -1.13
PTCH1-206ENST00000421141 DEFB105AQ8NG35 78 aa8.01□□□□□ -1.13
PTCH1-206ENST00000421141 RBMY1FQ15415 496 aaKnown RBP8.01□□□□□ -1.13
PTCH1-206ENST00000421141 BPTFQ12830 3046 aa8.01□□□□□ -1.13
PTCH1-206ENST00000421141 REG3AQ06141 175 aa8.01□□□□□ -1.13
PTCH1-206ENST00000421141 KPRPQ5T749 579 aaPredicted RBP8.01□□□□□ -1.13
PTCH1-206ENST00000421141 TOMM6Q96B49 74 aa8.01□□□□□ -1.13
PTCH1-206ENST00000421141 SIVA1O15304 175 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 FLNBO75369 2602 aaKnown RBP8□□□□□ -1.13
PTCH1-206ENST00000421141 INAFM2P0DMQ5 153 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 WFDC10AQ9H1F0 79 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 TRBV20-1A0A075B6N2 111 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 NHLRC4P0CG21 123 aaPredicted RBP8□□□□□ -1.13
PTCH1-206ENST00000421141 ZFAND6Q6FIF0 208 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 C11orf1Q9H5F2 150 aa8□□□□□ -1.13
PTCH1-206ENST00000421141 RPL39P62891 51 aaKnown RBP8□□□□□ -1.13
PTCH1-206ENST00000421141 SOCS3O14543 225 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 DKK2Q9UBU2 259 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 ZNF580Q9UK33 172 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 CFAP126Q5VTH2 177 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 TRBV6-4A0A1B0GX49 114 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
PTCH1-206ENST00000421141 Q6ZVH6 145 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 H3BQ85 93 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 COX8AP10176 69 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 BAALCQ8WXS3 180 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 TIMM17AQ99595 171 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 CFAP46Q8IYW2 2715 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 NANOS2P60321 138 aaKnown RBP7.98□□□□□ -1.13
PTCH1-206ENST00000421141 U3KQK5 164 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 CEND1Q8N111 149 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 FRMD6-AS1P0C7T7 363 aa7.98□□□□□ -1.13
PTCH1-206ENST00000421141 HIST1H4AP62805 103 aaKnown RBP7.98□□□□□ -1.13
PTCH1-206ENST00000421141 IGLV2-18A0A075B6J9 118 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 C7orf33Q8WU49 177 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 C9JAW5 83 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 ZFAND2AQ8N6M9 145 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 HELZ2Q9BYK8 2649 aaKnown RBP7.97□□□□□ -1.13
PTCH1-206ENST00000421141 C19orf71A6NCJ1 209 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 LAMA2P24043 3122 aaKnown RBP7.97□□□□□ -1.13
PTCH1-206ENST00000421141 MPV17L2Q567V2 206 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 B9D2Q9BPU9 175 aa7.97□□□□□ -1.13
PTCH1-206ENST00000421141 CRIP2P52943 208 aaPredicted RBP7.96□□□□□ -1.13
PTCH1-206ENST00000421141 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.14
PTCH1-206ENST00000421141 M0R2N4 97 aa7.96□□□□□ -1.14
PTCH1-206ENST00000421141 IFITM1P13164 125 aa7.96□□□□□ -1.14
PTCH1-206ENST00000421141 MIAQ16674 131 aa7.96□□□□□ -1.14
PTCH1-206ENST00000421141 XIRP2A4UGR9 3374 aa7.96□□□□□ -1.14
PTCH1-206ENST00000421141 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.14
PTCH1-206ENST00000421141 IGHV4-4A0A075B6R2 117 aa7.95□□□□□ -1.14
PTCH1-206ENST00000421141 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
PTCH1-206ENST00000421141 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
PTCH1-206ENST00000421141 BRI3O95415 125 aa7.95□□□□□ -1.14
PTCH1-206ENST00000421141 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
PTCH1-206ENST00000421141 IGHV1-58A0A0C4DH39 117 aa7.94□□□□□ -1.14
PTCH1-206ENST00000421141 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
PTCH1-206ENST00000421141 A0A0J9YXV3 536 aa7.94□□□□□ -1.14
PTCH1-206ENST00000421141 FUSP35637 526 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTCH1-206ENST00000421141 Q6ZUT4 128 aa7.94□□□□□ -1.14
PTCH1-206ENST00000421141 CHCHD10Q8WYQ3 142 aaPredicted RBP7.94□□□□□ -1.14
PTCH1-206ENST00000421141 LELP1Q5T871 98 aa7.94□□□□□ -1.14
PTCH1-206ENST00000421141 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 hADV29S1A0JD25 119 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 MRPL52Q86TS9 123 aaKnown RBP7.93□□□□□ -1.14
PTCH1-206ENST00000421141 NEXN-AS1Q8NBZ9 246 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 C20orf203Q8NBC4 194 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 ORMDL1Q9P0S3 153 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
PTCH1-206ENST00000421141 CDH23Q9H251 3354 aa7.92□□□□□ -1.14
PTCH1-206ENST00000421141 RS1O15537 224 aa7.92□□□□□ -1.14
PTCH1-206ENST00000421141 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
PTCH1-206ENST00000421141 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.92□□□□□ -1.14
PTCH1-206ENST00000421141 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
PTCH1-206ENST00000421141 UFSP1Q6NVU6 142 aa7.92□□□□□ -1.14
PTCH1-206ENST00000421141 NAA38Q9BRA0 125 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms