RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.89
LRRTM1-205ENST00000417012 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.89
LRRTM1-205ENST00000417012 SPINK13Q1W4C9 94 aa9.46□□□□□ -0.9
LRRTM1-205ENST00000417012 CFHR3Q02985 330 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 ATXN8Q156A1 80 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 SORL1Q92673 2214 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 M0R2P5 195 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 KRTAP10-9P60411 292 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 NAV2Q8IVL1 2488 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 CD28P10747 220 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 TLN2Q9Y4G6 2542 aa9.45□□□□□ -0.9
LRRTM1-205ENST00000417012 ZFAND6Q6FIF0 208 aa9.44□□□□□ -0.9
LRRTM1-205ENST00000417012 LINC01356Q8N9X3 169 aa9.44□□□□□ -0.9
LRRTM1-205ENST00000417012 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
LRRTM1-205ENST00000417012 CREBBPQ92793 2442 aa9.44□□□□□ -0.9
LRRTM1-205ENST00000417012 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 IGHV3-30-3P0DP02 117 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 LINC01620Q4KN68 170 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 TEX29Q8N6K0 151 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 ZNF580Q9UK33 172 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 A0A096LNT2 108 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 K7EQG2 157 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 SPXQ9BT56 116 aa9.43□□□□□ -0.9
LRRTM1-205ENST00000417012 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 BEX4Q9NWD9 120 aaPredicted RBP9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 DSCR9P59020 149 aa9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 PSMB8P28062 276 aa9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 CR1P17927 2039 aa9.42□□□□□ -0.9
LRRTM1-205ENST00000417012 PRSS2P07478 247 aa9.41□□□□□ -0.9
LRRTM1-205ENST00000417012 TRBV30A0A0K0K1B3 111 aa9.41□□□□□ -0.9
LRRTM1-205ENST00000417012 ELANEP08246 267 aa9.41□□□□□ -0.9
LRRTM1-205ENST00000417012 MRPS36P82909 103 aaKnown RBP9.41□□□□□ -0.9
LRRTM1-205ENST00000417012 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
LRRTM1-205ENST00000417012 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
LRRTM1-205ENST00000417012 TRIAP1O43715 76 aa9.4□□□□□ -0.9
LRRTM1-205ENST00000417012 SNCGO76070 127 aa9.4□□□□□ -0.9
LRRTM1-205ENST00000417012 APCP25054 2843 aa9.4□□□□□ -0.9
LRRTM1-205ENST00000417012 DUX5Q96PT3 197 aa9.4□□□□□ -0.9
LRRTM1-205ENST00000417012 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 MYO9AB2RTY4 2548 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 IGHV1-58A0A0C4DH39 117 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 LITAFQ99732 161 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 NDUFA12Q9UI09 145 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 SONP18583 2426 aaKnown RBP9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 HTN1P15515 57 aa9.39□□□□□ -0.91
LRRTM1-205ENST00000417012 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 SYNJ2BPP57105 145 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE2BQ13066 116 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 H3BMM0 161 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 COX6CP09669 75 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 RNASE13Q5GAN3 156 aaKnown RBP9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
LRRTM1-205ENST00000417012 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 TEX49A0A1B0GTD5 131 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE7O76087 117 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 GAGE4Q13068 117 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 MIAQ16674 131 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 C2orf82Q6UX34 121 aa9.37□□□□□ -0.91
LRRTM1-205ENST00000417012 TMEM89A2RUT3 159 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 PROK1P58294 105 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 FAM104AQ969W3 186 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 RNF152Q8N8N0 203 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 AKAP9Q99996 3911 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 NF1P21359 2839 aa9.36□□□□□ -0.91
LRRTM1-205ENST00000417012 VPREB3Q9UKI3 123 aa9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 NPC2P61916 151 aa9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 RBMY1FQ15415 496 aaKnown RBP9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 CCDC168Q8NDH2 2452 aa9.35□□□□□ -0.91
LRRTM1-205ENST00000417012 J3QLI3 93 aa9.34□□□□□ -0.91
LRRTM1-205ENST00000417012 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms