RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
PAF1-202ENST00000416728 RAB19A4D1S5 217 aa9.24□□□□□ -0.93
PAF1-202ENST00000416728 PGLYRP4Q96LB8 373 aa9.24□□□□□ -0.93
PAF1-202ENST00000416728 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
PAF1-202ENST00000416728 IGHV3-64A0A075B6Q5 118 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 UBE2L6O14933 153 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 IFNA1P01562 189 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 RAB5CP51148 216 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 LYZL1Q6UWQ5 148 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 DPH3Q96FX2 82 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 GFRA4Q9GZZ7 299 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 DPH3P1Q9H4G8 78 aa9.23□□□□□ -0.93
PAF1-202ENST00000416728 FAT3Q8TDW7 4589 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 PDE6DO43924 150 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 AMTP48728 403 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 SULT1A2P50226 295 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 MEF2BQ02080 365 aaPredicted RBP9.22□□□□□ -0.93
PAF1-202ENST00000416728 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
PAF1-202ENST00000416728 COTL1Q14019 142 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 EIF5AL1Q6IS14 154 aaKnown RBP9.22□□□□□ -0.93
PAF1-202ENST00000416728 WDR73Q6P4I2 378 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 BIN3Q9NQY0 253 aa9.22□□□□□ -0.93
PAF1-202ENST00000416728 NTF3P20783 257 aa9.21□□□□□ -0.94
PAF1-202ENST00000416728 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
PAF1-202ENST00000416728 TRBV20OR9-2A0A075B6H5 130 aa9.2□□□□□ -0.94
PAF1-202ENST00000416728 C9orf62Q8N4C0 152 aa9.2□□□□□ -0.94
PAF1-202ENST00000416728 RNF185Q96GF1 192 aa9.2□□□□□ -0.94
PAF1-202ENST00000416728 TMA7Q9Y2S6 64 aaKnown RBP9.2□□□□□ -0.94
PAF1-202ENST00000416728 SLPIP03973 132 aa9.19□□□□□ -0.94
PAF1-202ENST00000416728 CTRLP40313 264 aa9.19□□□□□ -0.94
PAF1-202ENST00000416728 TWIST1Q15672 202 aa9.19□□□□□ -0.94
PAF1-202ENST00000416728 Q6ZRU5 148 aa9.19□□□□□ -0.94
PAF1-202ENST00000416728 A0A087WYN8 130 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 BCL2P10415 239 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 NUDT10Q8NFP7 164 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 NUDT11Q96G61 164 aa9.18□□□□□ -0.94
PAF1-202ENST00000416728 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
PAF1-202ENST00000416728 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
PAF1-202ENST00000416728 CNFNQ9BYD5 112 aa9.17□□□□□ -0.94
PAF1-202ENST00000416728 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
PAF1-202ENST00000416728 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
PAF1-202ENST00000416728 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
PAF1-202ENST00000416728 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
PAF1-202ENST00000416728 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.94
PAF1-202ENST00000416728 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
PAF1-202ENST00000416728 PKHD1L1Q86WI1 4243 aa9.15□□□□□ -0.95
PAF1-202ENST00000416728 TAGLN2P37802 199 aaKnown RBP9.14□□□□□ -0.95
PAF1-202ENST00000416728 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
PAF1-202ENST00000416728 COX6A2Q02221 97 aa9.14□□□□□ -0.95
PAF1-202ENST00000416728 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
PAF1-202ENST00000416728 SMIM15Q7Z3B0 74 aa9.14□□□□□ -0.95
PAF1-202ENST00000416728 C7orf33Q8WU49 177 aa9.14□□□□□ -0.95
PAF1-202ENST00000416728 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
PAF1-202ENST00000416728 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
PAF1-202ENST00000416728 UBR4Q5T4S7 5183 aa9.13□□□□□ -0.95
PAF1-202ENST00000416728 NCR2O95944 276 aa9.13□□□□□ -0.95
PAF1-202ENST00000416728 RNASEKQ6P5S7 137 aaKnown RBP9.13□□□□□ -0.95
PAF1-202ENST00000416728 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
PAF1-202ENST00000416728 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
PAF1-202ENST00000416728 H7C423 109 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 PHOX2AO14813 284 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
PAF1-202ENST00000416728 APCSP02743 223 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.12□□□□□ -0.95
PAF1-202ENST00000416728 IGKV2-24A0A0C4DH68 120 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 IGKV2-29A2NJV5 120 aaPredicted RBP9.12□□□□□ -0.95
PAF1-202ENST00000416728 K7EN84 100 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 MAJINQ3KP22 176 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 TEX261Q6UWH6 196 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
PAF1-202ENST00000416728 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
PAF1-202ENST00000416728 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
PAF1-202ENST00000416728 FGF6P10767 208 aa9.11□□□□□ -0.95
PAF1-202ENST00000416728 PRSS3P2Q8NHM4 247 aa9.11□□□□□ -0.95
PAF1-202ENST00000416728 GTSF1Q8WW33 167 aa9.11□□□□□ -0.95
PAF1-202ENST00000416728 ZNF25P17030 456 aaPredicted RBP9.1□□□□□ -0.95
PAF1-202ENST00000416728 FOXA3P55318 350 aaPredicted RBP9.1□□□□□ -0.95
PAF1-202ENST00000416728 PMCHP20382 165 aa9.09□□□□□ -0.95
PAF1-202ENST00000416728 FOXI1Q12951 378 aa9.09□□□□□ -0.95
PAF1-202ENST00000416728 TCTE3Q8IZS6 198 aa9.09□□□□□ -0.95
PAF1-202ENST00000416728 STPG4Q8N801 248 aa9.09□□□□□ -0.95
PAF1-202ENST00000416728 OR5A1Q8NGJ0 315 aa9.09□□□□□ -0.95
PAF1-202ENST00000416728 BTF3L4Q96K17 158 aa9.09□□□□□ -0.95
PAF1-202ENST00000416728 I3L3M4 83 aa9.08□□□□□ -0.96
PAF1-202ENST00000416728 GATCO43716 136 aaKnown RBP9.08□□□□□ -0.96
PAF1-202ENST00000416728 XCL1P47992 114 aa9.08□□□□□ -0.96
PAF1-202ENST00000416728 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
PAF1-202ENST00000416728 A8MWL6 223 aa9.07□□□□□ -0.96
PAF1-202ENST00000416728 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
PAF1-202ENST00000416728 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
PAF1-202ENST00000416728 A0A096LNI7 61 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 FAM231BA6NCW3 169 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 TMEM250H0YL14 139 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 CCL25O15444 150 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 LYPD6BQ8NI32 183 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms