RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 RBP4P02753 201 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 PRM1P04553 51 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 DBIP07108 87 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 COX4I1P13073 169 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 ACYP2P14621 99 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 EDDM3BP56851 147 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 DR1Q01658 176 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 WFDC2Q14508 124 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 INSL4Q14641 139 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 KLK9Q2XQG4 91 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 DEFB109BQ30KR1 87 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 FAM74A4Q5TZK3 123 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 CYP2G1PQ6ZSU1 146 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 Q6ZUT4 128 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 VSTM2AQ8TAG5 236 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 SMIM11BQ8TCY0 68 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 CYP4F30PQ9H0H9 118 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 GSKIPQ9P0R6 139 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 ERG28Q9UKR5 140 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 FAT2Q9NYQ8 4349 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 SIPA1L3O60292 1781 aaPredicted RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 KDM3BQ7LBC6 1761 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 MYO9AB2RTY4 2548 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 PRG4Q92954 1404 aaPredicted RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRANK1O15050 2925 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 NBPF19A0A087WUL8 3843 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 COL12A1Q99715 3063 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 PDE4DIPQ5VU43 2346 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 AFDNP55196 1824 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 VIRMAQ69YN4 1812 aaKnown RBP-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 KDM5CP41229 1560 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 ITPR2Q14571 2701 aa-0.15□□□□□ -2.43
TRAPPC13-203ENST00000415825 LRRC37A2A6NM11 1700 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 GOLGA3Q08378 1498 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 PXDNQ92626 1479 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 NBASA2RRP1 2371 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 LRRC37A3O60309 1634 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 LPAP08519 4548 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 LRBAP50851 2863 aa-0.16□□□□□ -2.43
TRAPPC13-203ENST00000415825 ZNF815PA8K554 130 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 TMEM14DPA8MWL7 114 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 CCDC179H3BU77 68 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 CFDP00746 253 aaPredicted RBP-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 TNFP01375 233 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 APOC1P02654 83 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPINK8P0C7L1 97 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 NCS1P62166 190 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 RBM3P98179 157 aaKnown RBP-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 ALX1Q15699 326 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 S100A7L2Q5SY68 101 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 SLC48A1Q6P1K1 146 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 CTAGE3PQ8IX95 158 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 DPH3Q96FX2 82 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPRR2FQ96RM1 72 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 VPS25Q9BRG1 176 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 TMEM242Q9NWH2 141 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 V9GYV3 84 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 WNK3Q9BYP7 1800 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYH9P35579 1960 aaKnown RBP-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 DNAH6Q9C0G6 4158 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 ADGRB1O14514 1584 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 NEBP20929 6669 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 AKAP9Q99996 3911 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 KALRNO60229 2985 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 PLXNA2O75051 1894 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 HERC2O95714 4834 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 MRC1P22897 1456 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 CCDC141Q6ZP82 1450 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 WDR7Q9Y4E6 1490 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 ACACBO00763 2458 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 LAMA3Q16787 3333 aa-0.16□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYCBP2O75592 4640 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 TLN2Q9Y4G6 2542 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 TSC2P49815 1807 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYO7BQ6PIF6 2116 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 PKHD1L1Q86WI1 4243 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 TRAV1-2A0A0B4J238 106 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 OVOS2A0A0J9YW53 1432 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 DISP2A7MBM2 1401 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 M0R2T5 61 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 M0R2Z0 102 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 M0R3E3 92 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 ZNF609O15014 1411 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPINK4O60575 86 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 MT1AP04731 61 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 APODP05090 189 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 GCHFRP30047 84 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 S100A3P33764 101 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 ADAMTS12P58397 1594 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 RPS25P62851 125 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 PRKDCP78527 4128 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 HAMPP81172 84 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 DCDP81605 110 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 KRTAP20-2Q3LI61 65 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPANXN1Q5VSR9 72 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYOM3Q5VTT5 1437 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 Q5VV11 94 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 OVOS2Q6IE36 1432 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms