RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 MAP6D1Q9H9H5 199 aa10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 ZGRF1Q86YA3 2104 aa10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 LY6LH3BQJ8 138 aa10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 NRGNQ92686 78 aa10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 PCNX2A6NKB5 2137 aa10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 NDUFA1O15239 70 aa10.38□□□□□ -0.75
SMARCA4-202ENST00000413806 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
SMARCA4-202ENST00000413806 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
SMARCA4-202ENST00000413806 HIST2H2BDQ6DRA6 164 aa10.37□□□□□ -0.75
SMARCA4-202ENST00000413806 NDUFC1O43677 76 aa10.37□□□□□ -0.75
SMARCA4-202ENST00000413806 MAPKAPK5-AS1Q8N8E1 139 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 TRIAP1O43715 76 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 DYSFO75923 2080 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 IGHV3-30P01768 117 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 IGHV3-30-5P0DP03 117 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 INSL3P51460 131 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
SMARCA4-202ENST00000413806 BPY2O14599 106 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 DIRC1Q969H9 104 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 U3KQK5 164 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 CCL18P55774 89 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 CACNA1HO95180 2353 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 TRBV30A0A0K0K1B3 111 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 PLA2G5P39877 138 aa10.35□□□□□ -0.75
SMARCA4-202ENST00000413806 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 PIK3CD-AS1Q5SR53 167 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 LINC01548A6NM66 108 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 PCNX1Q96RV3 2341 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 SEC61GP60059 68 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 ZFAND3Q9H8U3 227 aa10.34□□□□□ -0.75
SMARCA4-202ENST00000413806 TNRC6BQ9UPQ9 1833 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 K7EQG2 157 aa10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 Q6Q795 121 aa10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 PRORYQ9H606 182 aa10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 PRO0255Q9UI72 69 aa10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 NCOA6Q14686 2063 aaPredicted RBP10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 TIRAPP58753 221 aa10.33□□□□□ -0.76
SMARCA4-202ENST00000413806 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
SMARCA4-202ENST00000413806 C22orf34Q6ZV56 151 aa10.32□□□□□ -0.76
SMARCA4-202ENST00000413806 Q6YL49 198 aa10.32□□□□□ -0.76
SMARCA4-202ENST00000413806 SCXQ7RTU7 201 aa10.32□□□□□ -0.76
SMARCA4-202ENST00000413806 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
SMARCA4-202ENST00000413806 C10orf142B7Z368 130 aa10.32□□□□□ -0.76
SMARCA4-202ENST00000413806 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
SMARCA4-202ENST00000413806 H7C423 109 aa10.31□□□□□ -0.76
SMARCA4-202ENST00000413806 PRO3102Q9H379 93 aa10.31□□□□□ -0.76
SMARCA4-202ENST00000413806 C11orf71Q6IPW1 123 aa10.31□□□□□ -0.76
SMARCA4-202ENST00000413806 ABCA1O95477 2261 aa10.31□□□□□ -0.76
SMARCA4-202ENST00000413806 DEFB135Q30KP9 77 aa10.3□□□□□ -0.76
SMARCA4-202ENST00000413806 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
SMARCA4-202ENST00000413806 NBASA2RRP1 2371 aa10.3□□□□□ -0.76
SMARCA4-202ENST00000413806 CRIP1P50238 77 aa10.3□□□□□ -0.76
SMARCA4-202ENST00000413806 COX7BP24311 80 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 A6NED7 52 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 IGLV2-11P01706 119 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 SLPIP03973 132 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 RNF185Q96GF1 192 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 ESM1Q9NQ30 184 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 TECTAO75443 2155 aa10.29□□□□□ -0.76
SMARCA4-202ENST00000413806 CEMP1Q6PRD7 247 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-202ENST00000413806 C19orf84I3L1E1 186 aa10.28□□□□□ -0.76
SMARCA4-202ENST00000413806 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
SMARCA4-202ENST00000413806 FREM1Q5H8C1 2179 aa10.28□□□□□ -0.76
SMARCA4-202ENST00000413806 SERP1Q9Y6X1 66 aa10.28□□□□□ -0.76
SMARCA4-202ENST00000413806 FAM19A5Q7Z5A7 132 aaPredicted RBP10.27□□□□□ -0.76
SMARCA4-202ENST00000413806 IGHV4-31P0DP07 118 aa10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 UFSP1Q6NVU6 142 aa10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 RETNQ9HD89 108 aa10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.778e-7■■■■□ 21.9
SMARCA4-202ENST00000413806 H0Y9J4 135 aa10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 Q8N6K4 173 aa10.27□□□□□ -0.77
SMARCA4-202ENST00000413806 LYRM9A8MSI8 78 aa10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 DEFB114Q30KQ6 69 aa10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 DOPEY2Q9Y3R5 2298 aa10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 Q6ZTI0 123 aa10.26□□□□□ -0.77
SMARCA4-202ENST00000413806 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
SMARCA4-202ENST00000413806 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
SMARCA4-202ENST00000413806 CREBBPQ92793 2442 aa10.25□□□□□ -0.77
SMARCA4-202ENST00000413806 LINC00308Q8TCZ7 52 aa10.25□□□□□ -0.77
SMARCA4-202ENST00000413806 LINC00526Q96FQ7 95 aa10.25□□□□□ -0.77
SMARCA4-202ENST00000413806 M0QY20 66 aa10.24□□□□□ -0.77
SMARCA4-202ENST00000413806 PCDH15Q96QU1 1955 aa10.24□□□□□ -0.77
SMARCA4-202ENST00000413806 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
SMARCA4-202ENST00000413806 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
SMARCA4-202ENST00000413806 LST1O00453 97 aa10.23□□□□□ -0.77
SMARCA4-202ENST00000413806 DEFB4AO15263 64 aa10.23□□□□□ -0.77
SMARCA4-202ENST00000413806 PRR15LQ9BU68 103 aa10.23□□□□□ -0.77
SMARCA4-202ENST00000413806 Q6JHZ5 121 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 347.1 ms