RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ATP6V0E2Q8NHE4 81 aa5.57□□□□□ -1.52
UPF3AP1-201ENST00000413731 BORCS7Q96B45 105 aa5.57□□□□□ -1.52
UPF3AP1-201ENST00000413731 SRRM2Q9UQ35 2752 aaKnown RBP5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 UBR4Q5T4S7 5183 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 TRBV10-1A0A0K0K1A3 114 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 A8MWL6 223 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 RAB4BP61018 213 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 RPL36AP83881 106 aaKnown RBP5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 C15orf54Q8N8G6 183 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 RPL36ALQ969Q0 106 aaKnown RBP5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 GTSF1LQ9H1H1 148 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 SMDT1Q9H4I9 107 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 NAT8Q9UHE5 227 aa5.56□□□□□ -1.52
UPF3AP1-201ENST00000413731 H7C1H1 209 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 ATP6V1G1O75348 118 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 LINC00694P0DN24 101 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 EVI2AP22794 236 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 AMTP48728 403 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 RPL23P62829 140 aaKnown RBP5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 TWIST1Q15672 202 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 TMEM241Q24JQ0 296 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 LELP1Q5T871 98 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 SMIM15Q7Z3B0 74 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 PGLYRP4Q96LB8 373 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
UPF3AP1-201ENST00000413731 TRBV7-3A0A075B6L6 115 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 TRAV9-2A0A087WT02 112 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 A0A087WWC5 75 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 IGHV3-38A0A0C4DH36 116 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 NTF3P20783 257 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 NFE4Q86UQ8 179 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 C10orf126Q8N4M7 172 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 TSKUQ8WUA8 353 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 GTSF1Q8WW33 167 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 ISOC2Q96AB3 205 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 OSTCQ9NRP0 149 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 Q9UF83 564 aa5.54□□□□□ -1.52
UPF3AP1-201ENST00000413731 LINC00862A6NCI5 91 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 IGHV3-30P01768 117 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 IGHV3-33P01772 117 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 IGHV3-30-5P0DP03 117 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 UBE2D3P61077 147 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 UBE2D2P62837 147 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 UQCC3Q6UW78 93 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 NEXN-AS1Q8NBZ9 246 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 OR10G8Q8NGN5 311 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 CNFNQ9BYD5 112 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 URGCP-MRPS24S4R325 110 aa5.53□□□□□ -1.52
UPF3AP1-201ENST00000413731 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 A0A1B0GUT8 65 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 ADCYAP1P18509 176 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 LINC01556Q5JQF7 62 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 KCNIP4Q6PIL6 250 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 TMEM70Q9BUB7 260 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 GFRA4Q9GZZ7 299 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 V9GYV3 84 aa5.52□□□□□ -1.53
UPF3AP1-201ENST00000413731 IGLV5-52A0A0A0MRZ9 124 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 TMEM218A2RU14 115 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 FAM231BA6NCW3 169 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 F8W036 122 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 K7EP13 123 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 M0QY20 66 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 RASL11AQ6T310 242 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 Q9HAA7 133 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 NAT8BQ9UHF3 227 aa5.51□□□□□ -1.53
UPF3AP1-201ENST00000413731 A0A087WX48 190 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 TRAV26-2A0A0B4J265 109 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 LRCOL1A6NCL2 159 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 RIGQ13278 110 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 TMEM97Q5BJF2 176 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 DAZ4Q86SG3 579 aaKnown RBP5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 DNAJC30Q96LL9 226 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 CHCHD5Q9BSY4 110 aa5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 DAZ3Q9NR90 486 aaKnown RBP5.5□□□□□ -1.53
UPF3AP1-201ENST00000413731 TRBV25-1A0A075B6N4 114 aa5.49□□□□□ -1.53
UPF3AP1-201ENST00000413731 TRBV6-8A0A0A6YYG3 113 aa5.49□□□□□ -1.53
UPF3AP1-201ENST00000413731 KRTAP29-1A8MX34 341 aaPredicted RBP5.49□□□□□ -1.53
UPF3AP1-201ENST00000413731 PSCAO43653 123 aa5.49□□□□□ -1.53
UPF3AP1-201ENST00000413731 FOXA3P55318 350 aaPredicted RBP5.49□□□□□ -1.53
UPF3AP1-201ENST00000413731 NUP35Q8NFH5 326 aa5.49□□□□□ -1.53
UPF3AP1-201ENST00000413731 LRP1Q07954 4544 aaKnown RBP5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 TMEM262E9PQX1 116 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 PPP1R2P9O14990 202 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 PKIAP61925 76 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 LAGE3Q14657 143 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 MRPL54Q6P161 138 aaKnown RBP5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 NIT1Q86X76 327 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 GATD1Q8NB37 220 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 RPL39LQ96EH5 51 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms