RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
MRPL55-220ENST00000411464 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
MRPL55-220ENST00000411464 PHOX2AO14813 284 aa10.58□□□□□ -0.72
MRPL55-220ENST00000411464 IFNA1P01562 189 aa10.58□□□□□ -0.72
MRPL55-220ENST00000411464 WDR73Q6P4I2 378 aa10.58□□□□□ -0.72
MRPL55-220ENST00000411464 TPPP3Q9BW30 176 aa10.58□□□□□ -0.72
MRPL55-220ENST00000411464 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
MRPL55-220ENST00000411464 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
MRPL55-220ENST00000411464 CFAP161Q6P656 301 aa10.57□□□□□ -0.72
MRPL55-220ENST00000411464 UBE2L6O14933 153 aa10.56□□□□□ -0.72
MRPL55-220ENST00000411464 BCL2P10415 239 aa10.56□□□□□ -0.72
MRPL55-220ENST00000411464 RAB14P61106 215 aa10.56□□□□□ -0.72
MRPL55-220ENST00000411464 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
MRPL55-220ENST00000411464 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
MRPL55-220ENST00000411464 COX6A2Q02221 97 aa10.55□□□□□ -0.72
MRPL55-220ENST00000411464 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
MRPL55-220ENST00000411464 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
MRPL55-220ENST00000411464 RPL35P42766 123 aaKnown RBP10.54□□□□□ -0.72
MRPL55-220ENST00000411464 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
MRPL55-220ENST00000411464 RPS20P60866 119 aaKnown RBP10.54□□□□□ -0.72
MRPL55-220ENST00000411464 CACNG7P62955 275 aa10.54□□□□□ -0.72
MRPL55-220ENST00000411464 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
MRPL55-220ENST00000411464 CLLU1Q5K131 121 aa10.54□□□□□ -0.72
MRPL55-220ENST00000411464 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
MRPL55-220ENST00000411464 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
MRPL55-220ENST00000411464 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
MRPL55-220ENST00000411464 AMTP48728 403 aa10.53□□□□□ -0.72
MRPL55-220ENST00000411464 MEF2BQ02080 365 aaPredicted RBP10.53□□□□□ -0.72
MRPL55-220ENST00000411464 OR2D3Q8NGH3 330 aa10.53□□□□□ -0.72
MRPL55-220ENST00000411464 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
MRPL55-220ENST00000411464 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
MRPL55-220ENST00000411464 RNF213Q63HN8 5207 aa10.52□□□□□ -0.72
MRPL55-220ENST00000411464 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.73
MRPL55-220ENST00000411464 IGLC6P0CF74 106 aa10.52□□□□□ -0.73
MRPL55-220ENST00000411464 TAGLN2P37802 199 aaKnown RBP10.52□□□□□ -0.73
MRPL55-220ENST00000411464 COTL1Q14019 142 aa10.52□□□□□ -0.73
MRPL55-220ENST00000411464 C15orf56Q8N910 161 aa10.52□□□□□ -0.73
MRPL55-220ENST00000411464 LRP2P98164 4655 aa10.52□□□□□ -0.73
MRPL55-220ENST00000411464 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
MRPL55-220ENST00000411464 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
MRPL55-220ENST00000411464 F2Z2F3 143 aa10.51□□□□□ -0.73
MRPL55-220ENST00000411464 TRGC1P0CF51 173 aa10.51□□□□□ -0.73
MRPL55-220ENST00000411464 HIGD2BQ4VC39 106 aa10.51□□□□□ -0.73
MRPL55-220ENST00000411464 PRSS3P2Q8NHM4 247 aa10.51□□□□□ -0.73
MRPL55-220ENST00000411464 EIF5A2Q9GZV4 153 aaKnown RBP10.51□□□□□ -0.73
MRPL55-220ENST00000411464 XKRY2A2RUG3 117 aa10.5□□□□□ -0.73
MRPL55-220ENST00000411464 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
MRPL55-220ENST00000411464 STPG4Q8N801 248 aa10.5□□□□□ -0.73
MRPL55-220ENST00000411464 C11orf52Q96A22 123 aa10.5□□□□□ -0.73
MRPL55-220ENST00000411464 PDE6DO43924 150 aa10.49□□□□□ -0.73
MRPL55-220ENST00000411464 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
MRPL55-220ENST00000411464 NTF3P20783 257 aa10.48□□□□□ -0.73
MRPL55-220ENST00000411464 SRSF3P84103 164 aaKnown RBP10.48□□□□□ -0.73
MRPL55-220ENST00000411464 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
MRPL55-220ENST00000411464 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
MRPL55-220ENST00000411464 MED9Q9NWA0 146 aa10.48□□□□□ -0.73
MRPL55-220ENST00000411464 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
MRPL55-220ENST00000411464 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
MRPL55-220ENST00000411464 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-220ENST00000411464 SRP19P09132 144 aaKnown RBP10.46□□□□□ -0.73
MRPL55-220ENST00000411464 GNG4P50150 75 aa10.46□□□□□ -0.73
MRPL55-220ENST00000411464 ODF1Q14990 250 aa10.46□□□□□ -0.73
MRPL55-220ENST00000411464 PEA15Q15121 130 aa10.46□□□□□ -0.73
MRPL55-220ENST00000411464 REG3GQ6UW15 175 aa10.46□□□□□ -0.73
MRPL55-220ENST00000411464 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.73
MRPL55-220ENST00000411464 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.73
MRPL55-220ENST00000411464 GVQW2A0A096LPI5 108 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-220ENST00000411464 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
MRPL55-220ENST00000411464 C9JQL5 133 aa10.45□□□□□ -0.74
MRPL55-220ENST00000411464 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
MRPL55-220ENST00000411464 CEBPGP53567 150 aa10.45□□□□□ -0.74
MRPL55-220ENST00000411464 RNASEKQ6P5S7 137 aaKnown RBP10.45□□□□□ -0.74
MRPL55-220ENST00000411464 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
MRPL55-220ENST00000411464 A0A096LNI7 61 aa10.44□□□□□ -0.74
MRPL55-220ENST00000411464 TWIST1Q15672 202 aa10.44□□□□□ -0.74
MRPL55-220ENST00000411464 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
MRPL55-220ENST00000411464 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
MRPL55-220ENST00000411464 BIN3Q9NQY0 253 aa10.44□□□□□ -0.74
MRPL55-220ENST00000411464 PKIGQ9Y2B9 76 aa10.44□□□□□ -0.74
MRPL55-220ENST00000411464 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
MRPL55-220ENST00000411464 LINC00862A6NCI5 91 aa10.42□□□□□ -0.74
MRPL55-220ENST00000411464 H7C423 109 aa10.42□□□□□ -0.74
MRPL55-220ENST00000411464 NCR2O95944 276 aa10.42□□□□□ -0.74
MRPL55-220ENST00000411464 COMMD7Q86VX2 200 aa10.42□□□□□ -0.74
MRPL55-220ENST00000411464 GATD1Q8NB37 220 aa10.42□□□□□ -0.74
MRPL55-220ENST00000411464 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
MRPL55-220ENST00000411464 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
MRPL55-220ENST00000411464 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
MRPL55-220ENST00000411464 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
MRPL55-220ENST00000411464 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
MRPL55-220ENST00000411464 FGF6P10767 208 aa10.41□□□□□ -0.74
MRPL55-220ENST00000411464 FOXI1Q12951 378 aa10.41□□□□□ -0.74
MRPL55-220ENST00000411464 TNXBP22105 4242 aa10.41□□□□□ -0.74
MRPL55-220ENST00000411464 APCSP02743 223 aa10.4□□□□□ -0.74
MRPL55-220ENST00000411464 CTRLP40313 264 aa10.4□□□□□ -0.74
MRPL55-220ENST00000411464 Q6ZRP5 223 aa10.4□□□□□ -0.74
MRPL55-220ENST00000411464 XCL1P47992 114 aa10.39□□□□□ -0.75
MRPL55-220ENST00000411464 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
MRPL55-220ENST00000411464 NUDT10Q8NFP7 164 aa10.39□□□□□ -0.75
MRPL55-220ENST00000411464 NUDT11Q96G61 164 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms